AT4G13000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G25250.1); Has 90354 Blast hits to 89318 proteins in 3214 species: Archae - 80; Bacteria - 12840; Metazoa - 34852; Fungi - 11582; Plants - 13206; Viruses - 261; Other Eukaryotes - 17533 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7598099..7599217 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42161.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.36 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 372 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNHLLPPEN KIPTLNFDHL EIFSALGRGS KGVVFLVKAD NKWLALKVIL RESIESKKAK DEYKRISFEQ GVLSRFDHPL FPRLHGVIST DKVIGYAIDY 101: CPGRDLNSLR KKQSEEMFSD EIIRFYAAEL VIALEYLHNQ GIVYRDLKPD NVMIQENGHL MLVDFDLSTN LPPRTPQSSF SSSPRLSTAT KKERSIFAFS 201: GLCNSGISPD DSVSRSSESE FSGEKSNSFV GTEEYVAPEV ITGSGHDFAV DWWSLGVVLY EMLYGATPFR GSNRKETFLK ILTEPPSLVG ETTSLRDLVR 301: KLLEKDPSRR INVEGIKGHD FFKGLDWDLV LKVSRPPYIP APENYEISKI DVEKFVHEIF TKCEHNGNFI VF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)