AT4G12440.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.993 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : adenine phosphoribosyl transferase 4 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
adenine phosphoribosyl transferase 4 (APT4); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 3 (TAIR:AT4G22570.1); Has 7821 Blast hits to 7821 proteins in 2409 species: Archae - 188; Bacteria - 5134; Metazoa - 169; Fungi - 179; Plants - 165; Viruses - 0; Other Eukaryotes - 1986 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:7376268..7378865 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 19988.50 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.83 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.11 | ||||||||||||||||||||||||||||||||||||||||
Length | 178 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSENEVKDPR IDGIKTKIRV VPDFPKKGIM FQDITTLLLD PKAFKDTIDL FVERYRDMNI SVVAGIEARG FIFGSPIALA IGAKFVPLRK PKKLPGQIIF 101: EEYELEYGSD RLEMHVEAVD SGDRALVVDD LIATGGTLCA AMNLLSKFFS FFNNISLVPK LLLSFKWLPI DSNHLPLQ |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)