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AT4G11980.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 14
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nudix hydrolase homolog 14 (NUDX14); FUNCTIONS IN: hydrolase activity, ADP-sugar diphosphatase activity, ADP-ribose pyrophosphohydrolase activity, ADP-glucose pyrophosphohydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G11980-MONOMEREC:3.6.1.21eggNOG:COG0494eggNOG:KOG3041
EMBL:AJ748742EMBL:AL049638EMBL:AL161533EMBL:AY052271
EMBL:BT001146EMBL:CP002687EnsemblPlants:AT4G11980EnsemblPlants:AT4G11980.1
entrez:826805Gene3D:3.90.79.10GeneID:826805Genevisible:Q9SZ63
GO:GO:0009507GO:GO:0009570GO:GO:0019144GO:GO:0046872
GO:GO:0080041GO:GO:0080042Gramene:AT4G11980.1hmmpanther:PTHR11839
hmmpanther:PTHR11839:SF6HOGENOM:HOG000174303InParanoid:Q9SZ63InterPro:IPR000086
InterPro:IPR015797KEGG:ath:AT4G11980KO:K18447OMA:YEMAQRE
PaxDb:Q9SZ63Pfam:PF00293Pfam:Q9SZ63Pfscan:PS51462
PhylomeDB:Q9SZ63PIR:T06605PRIDE:Q9SZ63PRO:PR:Q9SZ63
PROSITE:PS51462ProteinModelPortal:Q9SZ63Proteomes:UP000006548RefSeq:NP_567384.1
STRING:3702.AT4G11980.1SUPFAM:SSF55811TAIR:AT4G11980tair10-symbols:ATNUDT14
tair10-symbols:ATNUDX14tair10-symbols:NUDX14UniGene:At.48848UniGene:At.68491
UniProt:Q9SZ63
Coordinates (TAIR10) chr4:-:7183845..7185551
Molecular Weight (calculated) 34255.60 Da
IEP (calculated) 7.62
GRAVY (calculated) -0.15
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGFTLLPSR LLAFPSRALP RRLHHHHAKL ILRCKMSSSS SSLTQSITLP SQPNEPVLVS ATAGISSSDF RDAIDSSLFR NWLRNLESES GILADGSMTL
101: KQVLIQGVDM FGKRIGFLKF KADIFDKETG QKVPGIVFAR GPAVAVLILL ESDGETYAVL TEQVRVPTGK IVLELPAGML DDDKGDFVGT AVREVEEEIG
201: IKLKKEDMVD LTAFLDPSTG YRIFPSPGGC DEEMSVFLYR GQVEKETIRQ LQGKETGLRE HGEFIKVRLI PYRELWRKTA DAKVLMSIGL YEMAQREGLV
301: SSQRLKPNS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)