AT4G11800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7093666..7098519 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 116570.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||||||
| Length | 1013 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVSERHSARL YNSLPMESFR TILTHTYPYP HEHSRHAIIA VLFGCLFFIS SDNMQTLIEK FSVKWWSMYA CLLGFFYFFS SPFIQKTIRP NYSNFSRWYI 0101: AWILVAALYH LPNFQSMGLD LRMNLSLFLT IYISSILFLV VFHIIFLGLW YVGLVSRVAG RRPEILTILQ NCAVLSMACC IFYSHCGNRA VLRQKPLGRQ 0201: YTSWFSFWKR EHRHNTWLAK FIRMNELKDQ VCSSWFAPVG SASDYPLLSK WFIYGEIACN GSCPDSADEI SPIYSLWATF IGLYIANYVV ERSTGWALTH 0301: PLSVDKYEKL KNQQLKPDFL DMVPWYSGTS ADLFKTVFDL LVSVTVFLGR FDMRMLQAAM TKSGDASGRK ELLYDHLAEK QDFWFDFMAD TGDGGNSSYS 0401: VAKLLAQPSL RVPVANNFIS LPRGNVLLIG GDLAYPNPSS FTYEKRLFCP FEYALQPPRW YKNDSIAVDK PELPNGVSDL KSYEGPQCFL IPGNHDWFDG 0501: LNTFMRYICH KSWLGGWLMP QKKSYFALQL PKGWWVFGLD LALHGDIDVD QFKFFSELVK DKVGESDAVI IITHEPNWLL DWYWSGDTGQ NVRHLICDVL 0601: KYRCKLRMAG DLHHYMRHSC NQSDGPAHVQ HLLVNGCGGA FLHPTHVFSK FSKFYGASYG SKVAYPSFDD SSKIALGNIL KFRKKNWQFD FIGGIIYFIL 0701: VFSLFPQCKL AHVLRGDSFS GHLESFLGTV WSAFAYVMEQ SYVSFTGVLM LLITAITFVP SKVSLKKRVV IGVLHVAAHL MAALILMLML ELGIEICIQH 0801: NLLANSGYHT LYEWYKSVEN EHFPDPTGLR ARIEQWTFGL YPACIKYLMS AFDVPEVMAV TRTNICKHGM ESLSRSGAVI YYASVFLYFW VFSTPVVSMV 0901: FGSYLYICIN WFHIHFDEAF SSLRIANYKS FTRFHILEDG DIEVFTLAVD KVPKDWKLDK DWDSEPKQSF KMSYEREFPS KWGASTSQQD PVNTVKIVDR 1001: FVIHRSQKEN GEC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)