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AT4G11170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.884
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response, response to ozone; LOCATED IN: mitochondrion; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G49140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JV26eggNOG:ENOG41106B0EMBL:AF080120EMBL:AL049876EMBL:AL161531EMBL:CP002687EnsemblPlants:AT4G11170
EnsemblPlants:AT4G11170.1entrez:826718Gene3D:3.40.50.10140Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:826718Genevisible:O82500
GO:GO:0005739GO:GO:0006952GO:GO:0007165GO:GO:0010193GO:GO:0043531Gramene:AT4G11170.1hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InParanoid:O82500InterPro:IPR000157InterPro:IPR002182InterPro:IPR003593InterPro:IPR011713
InterPro:IPR011991InterPro:IPR027417InterPro:IPR032675KEGG:ath:AT4G11170OMA:WCESLVEPaxDb:O82500Pfam:O82500
Pfam:PF00931Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:O82500PIR:T01916PIR:T08196
PRIDE:O82500PRO:PR:O82500PROSITE:PS50104ProteinModelPortal:O82500Proteomes:UP000006548RefSeq:NP_192855.1SMART:SM00255
SMART:SM00382SMR:O82500STRING:3702.AT4G11170.1SUPFAM:SSF46785SUPFAM:SSF52058SUPFAM:SSF52200SUPFAM:SSF52540
TAIR:AT4G11170UniGene:At.49404UniProt:O82500
Coordinates (TAIR10) chr4:+:6811127..6817130
Molecular Weight (calculated) 126090.00 Da
IEP (calculated) 7.36
GRAVY (calculated) -0.32
Length 1095 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSSNSWR YDVFPSFRGE DVRNNFLSHL LKEFESKGIV TFRDDHIKRS HTIGHELRAA IRESKISVVL FSENYASSSW CLDELIEIMK CKEEQGLKVM
0101: PVFYKVDPSD IRKQTGKFGM SFLETCCGKT EERQHNWRRA LTDAANILGD HPQNWDNEAY KITTISKDVL EKLNATPSRD FNDLVGMEAH IAKMESLLCL
0201: ESQGVRIVGI WGPAGVGKTT IARALYNQYH ENFNLSIFME NVRESYGEAG LDDYGLKLHL QQRFLSKLLD QKDLRVRHLG AIEERLKSQK VLIILDDVDN
0301: IEQLKALAKE NQWFGNKSRI VVTTQNKQLL VSHDINHMYQ VAYPSKQEAL TIFCQHAFKQ SSPSDDLKHL AIEFTTLAGH LPLALRVLGS FMRGKGKEEW
0401: EFSLPTLKSR LDGEVEKVLK VGYDGLHDHE KDLFLHIACI FSGQHENYLK QMIIANNDTY VSFGLQVLAD KSLIQKFENG RIEMHSLLRQ LGKEVVRKQS
0501: IYEPGKRQFL MNAKETCGVL SNNTGTGTVL GISLDMCEIK EELYISEKTF EEMRNLVYLK FYMSSPIDDK MKVKLQLPEE GLSYLPQLRL LHWDAYPLEF
0601: FPSSFRPECL VELNMSHSKL KKLWSGVQPL RNLRTMNLNS SRNLEILPNL MEATKLNRLD LGWCESLVEL PSSIKNLQHL ILLEMSCCKK LEIIPTNINL
0701: PSLEVLHFRY CTRLQTFPEI STNIRLLNLI GTAITEVPPS VKYWSKIDEI CMERAKVKRL VHVPYVLEKL CLRENKELET IPRYLKYLPR LQMIDISYCI
0801: NIISLPKLPG SVSALTAVNC ESLQILHGHF RNKSIHLNFI NCLKLGQRAQ EKIHRSVYIH QSSYIADVLP GEHVPAYFSY RSTGSSIMIH SNKVDLSKFN
0901: RFKVCLVLGA GKRFEGCDIK FYKQFFCKPR EYYVPKHLDS PLLKSDHLCM CEFELMPPHP PTEWELLHPN EFLEVSFESR GGLYKCEVKE CGLQFLEPHE
1001: TSEFRYLSPH LYLGGSWIGN SSSSIEEIIH VDQEESSSDS EEIIYADQEE SSSGIEEIIH AEREGTNRRK SVMRWIKVGA RKMGLSLECL KPWTR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)