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AT4G10490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.963
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G10490-MONOMEREC:1.14.11.-EC:1.14.13.-eggNOG:COG3491
eggNOG:KOG0143EMBL:AF118222EMBL:AL049524EMBL:AL161517
EMBL:BT003944EMBL:BT005030EMBL:CP002687EnsemblPlants:AT4G10490
EnsemblPlants:AT4G10490.1entrez:826641Gene3D:2.60.120.330GeneID:826641
GO:GO:0002229GO:GO:0046244GO:GO:0046872GO:GO:0051213
Gramene:AT4G10490.1gramene_pathway:1.14.11.9gramene_pathway:PWY-5152gramene_pathway:PWY1F-823
gramene_pathway:PWY1F-FLAVSYNhmmpanther:PTHR10209hmmpanther:PTHR10209:SF196HOGENOM:HOG000276735
InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT4G10490
OMA:FAHACSSPaxDb:Q9ZSA7Pfam:PF03171Pfam:PF14226
Pfscan:PS51471PhylomeDB:Q9ZSA7PIR:T04184PROSITE:PS51471
ProteinModelPortal:Q9ZSA7Proteomes:UP000006548RefSeq:NP_192787.1SMR:Q9ZSA7
SUPFAM:SSF51197TAIR:AT4G10490UniGene:At.33627UniProt:Q9ZSA7
Coordinates (TAIR10) chr4:+:6483900..6485179
Molecular Weight (calculated) 39284.30 Da
IEP (calculated) 5.59
GRAVY (calculated) -0.34
Length 348 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASKLLVSD IASVVDHVPS NYVRPVSDRP KMSEVQTSGD SIPLIDLHDL HGPNRADIIN QFAHACSSCG FFQIKNHGVP EETIKKMMNA AREFFRQSES
101: ERVKHYSADT KKTTRLSTSF NVSKEKVSNW RDFLRLHCYP IEDFINEWPS TPISFREVTA EYATSVRALV LTLLEAISES LGLAKDRVSN TIGKHGQHMA
201: INYYPRCPQP ELTYGLPGHK DANLITVLLQ DEVSGLQVFK DGKWIAVNPV PNTFIVNLGD QMQVISNEKY KSVLHRAVVN SDMERISIPT FYCPSEDAVI
301: SPAQELINEE EDSPAIYRNF TYAEYFEKFW DTAFDTESCI DSFKASTA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)