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AT4G10100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : co-factor for nitrate, reductase and xanthine dehydrogenase 7
Curator
Summary (TAIR10)
molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.
Computational
Description (TAIR10)
co-factor for nitrate, reductase and xanthine dehydrogenase 7 (CNX7); CONTAINS InterPro DOMAIN/s: ThiamineS (InterPro:IPR003749), Molybdopterin converting factor, subunit 1 (InterPro:IPR010034), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2740-MONOMERBioCyc:ARA:GQT-2741-MONOMERBioGrid:11900eggNOG:ENOG410XUS9eggNOG:KOG3474EMBL:AF208343EMBL:AK117700
EMBL:AK317483EMBL:AL049487EMBL:AL161516EMBL:AY087485EMBL:BT024545EMBL:CP002687EnsemblPlants:AT4G10100
EnsemblPlants:AT4G10100.1EnsemblPlants:AT4G10100.2EnsemblPlants:AT4G10100.3entrez:826601Gene3D:3.10.20.30GeneID:826601Genevisible:Q9S7A3
GO:GO:0000166GO:GO:0005829GO:GO:0006777GO:GO:0009734GO:GO:0018315GO:GO:0019008GO:GO:0030366
Gramene:AT4G10100.1Gramene:AT4G10100.2Gramene:AT4G10100.3HAMAP:MF_03051hmmpanther:PTHR33359hmmpanther:PTHR33359:SF1HOGENOM:HOG000280991
InParanoid:Q9S7A3InterPro:IPR003749InterPro:IPR010034InterPro:IPR012675InterPro:IPR016155InterPro:IPR028887iPTMnet:Q9S7A3
KEGG:ath:AT4G10100KO:K03635OMA:VHVLFFAPaxDb:Q9S7A3Pfam:PF02597Pfam:Q9S7A3PhylomeDB:Q9S7A3
PIR:T04060PRIDE:Q9S7A3PRO:PR:Q9S7A3ProteinModelPortal:Q9S7A3Proteomes:UP000006548RefSeq:NP_001078366.1RefSeq:NP_567352.1
RefSeq:NP_849354.1STRING:3702.AT4G10100.1SUPFAM:SSF54285TAIR:AT4G10100tair10-symbols:CNX7tair10-symbols:SIR5TIGRfam:TIGR01682
TIGRFAMs:TIGR01682UniGene:At.2966UniGene:At.33652UniPathway:UPA00344UniProt:Q9S7A3
Coordinates (TAIR10) chr4:+:6309091..6309381
Molecular Weight (calculated) 10533.70 Da
IEP (calculated) 4.30
GRAVY (calculated) -0.05
Length 96 amino acids
Sequence (TAIR10)
(BLAST)
1: MDKEVTKIES DDTSSVEIKV LLFARARELT GVPDLTLKMP SGSTTQKCLD ELVLKFPSLE EVRSCVVLAL NEEYTTDSAI VQHRDELAII PPISGG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)