AT4G10030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52570.1); Has 3883 Blast hits to 3883 proteins in 1174 species: Archae - 26; Bacteria - 2816; Metazoa - 266; Fungi - 159; Plants - 102; Viruses - 3; Other Eukaryotes - 511 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:6270490..6273098 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42150.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.70 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||
| Length | 380 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSAVSCSTAS SSGGCAFRFR SKTSIHSPNF IRIGTNSQSD RFCNHRLELV HGTRKVKGAS VRMALVEERQ STSKDVAEPP RVLAYDLVQG ALVKWRWKDD 101: KSVPDTPTAV LLHGILGSGK NWGTFARRLA HEFPTWQFLL VDLRCHGDST SLKKRGPHSV ATTASDVLKL VGQLRLTPRV LVGHSFGGKV VLSMVEQAAK 201: PLPRPVRAWV LDATPGKVRA GGDGEDHPRE LISFLRKLPK VVLSKREVLK ALINEGFSND VAQWVITNLR PTGPSASSFS WTFDLDGIAE LYQSYEETNL 301: WNFVENLPRG VHVNFLKAER SLHRWALEDL QRIHAAEELA SEEGGGVEMH VLEDAGHWVH TDNPDGLFRI LSSSFQVLRA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)