suba logo
AT4G09900.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.784
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methyl esterase 12
Curator
Summary (TAIR10)
Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.
Computational
Description (TAIR10)
methyl esterase 12 (MES12); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2424 Blast hits to 2424 proteins in 522 species: Archae - 7; Bacteria - 1330; Metazoa - 8; Fungi - 32; Plants - 631; Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G09900-MONOMEREC:3.1.1.-eggNOG:ENOG410IH43eggNOG:ENOG4111IVVEMBL:AK221404EMBL:AL049481EMBL:AL161516
EMBL:AY054619EMBL:AY081515EMBL:CP002687EnsemblPlants:AT4G09900EnsemblPlants:AT4G09900.1entrez:826580ESTHER:arath-AT4g09900
Gene3D:3.40.50.1820GeneID:826580Genevisible:Q940H7GO:GO:0009507GO:GO:0016787Gramene:AT4G09900.1hmmpanther:PTHR10992
hmmpanther:PTHR10992:SF785HOGENOM:HOG000133452InParanoid:Q940H7InterPro:IPR000073InterPro:IPR029058iPTMnet:Q940H7KEGG:ath:AT4G09900
MEROPS:S33.A67OMA:WYKTISHPaxDb:Q940H7Pfam:PF12697Pfam:Q940H7PhylomeDB:Q940H7PIR:T03994
PIR:T03995PRIDE:Q940H7PRO:PR:Q940H7ProteinModelPortal:Q940H7Proteomes:UP000006548RefSeq:NP_192728.2SMR:Q940H7
SUPFAM:SSF53474TAIR:AT4G09900tair10-symbols:ATMES12tair10-symbols:MES12UniGene:At.26456UniProt:Q940H7
Coordinates (TAIR10) chr4:-:6221767..6223924
Molecular Weight (calculated) 38931.90 Da
IEP (calculated) 9.32
GRAVY (calculated) -0.34
Length 349 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNRVICMKK KDVVIRSGGD GSRSKRVNRS QRKLLADEEN LHRRALSMAI HQAQVSQRFD GSMSRRIGST SSRRGTLSDS FSNNKQVPEF LESLKVKKFV
101: LVHGEGFGAW CWYKTIASLE ESGLSPVTVD LAGSGFNMTD ANSVSTLEEY SKPLIELIQN LPAEEKVILV GHSTGGACVS YALERFPEKI SKAIFICATM
201: VTDGQRPFDV FADELGSAER FMKESQFLIY GNGKDNPATG FMFEKQHMKG LYFNQSPNKD IALSMISMRP VPLGPMMEKL SLSAERYGKG RRFYVQTLDD
301: LALSPDVQEK LVRENSPEAV FKIKGSDHCP FFSKPQSLHK ILLEIAQIP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)