AT4G09630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.901 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF616) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G34550.1); Has 3181 Blast hits to 2512 proteins in 288 species: Archae - 26; Bacteria - 157; Metazoa - 687; Fungi - 206; Plants - 314; Viruses - 69; Other Eukaryotes - 1722 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:6083860..6087802 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81274.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.84 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.84 | ||||||||||||||||||||||||||||||||
| Length | 711 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAQYRQSGTE RFLGGRSGYN PYVNGGASSD HVAIGIRNGG GSNFGVVTQH GKASRWRRST RLDRNRRCGV GSLVFVLCVV LVVCVSAYYY FSGYTNFGKD 101: DKGIDTAEGD FLTNVSRTDP LKILKFGHGS VLHGRDSRDW DKDDRRRDED YNEDDVEDKS VVEERSVSEV KKDVSLRNPL KGSDWKGVGF YNEAGRDELK 201: KYEVEYQASL VKGGQSLKEN DGHHQPFDTE SNEDDSIDSH DTQGDEYVDM GHDGDENEES HKDNHKHNED GAEESHKDSH RHNEDGAEES HKETASVFLH 301: STTKHQKIEK VHGATSKRSR GKSSLLSGKS GKTSQTDAKR RARSHRFSGV SCEMKLLNSS QQIQEPLKTQ NFAAPSLQYI QMEDKPDGEE QWEPKFAGHQ 401: SLQEREDSFL VQEQKIHCGF VKAPEGLPST GFDLTEDDAN YISKCHIAVI SCIFGNSDRL RHPANKMVSS LSRKDVCFVV FVDEITMQTL SAEGQVPDGA 501: GFVGLWKLVV VRNLPYTDMR RVGKIPKLLP HRLFTSARYS IWLDSKLRLQ LDPLVILEYF LWREGHEYAI SNHYDRHCLW EEVAQNKKLN KYNHTVIDQQ 601: FEFYQSDGLT RFNASDPHKL LPSNVPEGSF IVREHTPMSN LFSCLWFNEV ERFTPRDQLS FAYTYQKLTR MNPDTPFNLH MFKDCERRKI TKLFRHRSEE 701: KRNLIQAATT Q |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)