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AT4G09010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ascorbate peroxidase 4
Curator
Summary (TAIR10)
Encodes a protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.
Computational
Description (TAIR10)
ascorbate peroxidase 4 (APX4); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 1182 Blast hits to 1180 proteins in 264 species: Archae - 20; Bacteria - 119; Metazoa - 0; Fungi - 348; Plants - 604; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
Protein Annotations
BioGrid:11779EC:1.-.-.-eggNOG:ENOG410IGN6eggNOG:ENOG410XSAAEMBL:AC005359EMBL:AF370534EMBL:AF441713
EMBL:AL161513EMBL:AY072503EMBL:CP002687EnsemblPlants:AT4G09010EnsemblPlants:AT4G09010.1entrez:826480GeneID:826480
Genevisible:P82281GO:GO:0004601GO:GO:0005634GO:GO:0005737GO:GO:0006979GO:GO:0009507GO:GO:0009534
GO:GO:0009535GO:GO:0009543GO:GO:0009579GO:GO:0020037GO:GO:0031977Gramene:AT4G09010.1hmmpanther:PTHR31356
hmmpanther:PTHR31356:SF6HOGENOM:HOG000005679InParanoid:P82281IntAct:P82281InterPro:IPR002016InterPro:IPR002207InterPro:IPR010255
iPTMnet:P82281KEGG:ath:AT4G09010KO:K00434OMA:NLLYTAYPaxDb:P82281PDB:3RRWPDBsum:3RRW
PeroxiBase:3920Pfam:P82281Pfam:PF00141Pfscan:PS50873PhylomeDB:P82281PIR:A85091PRIDE:P82281
PRINTS:PR00459PRO:PR:P82281ProteinModelPortal:P82281Proteomes:UP000006548RefSeq:NP_192640.1SMR:P82281STRING:3702.AT4G09010.1
SUPFAM:SSF48113TAIR:AT4G09010tair10-symbols:APX4tair10-symbols:TL29UniGene:At.22637UniGene:At.47549UniProt:P82281
Coordinates (TAIR10) chr4:-:5777502..5779338
Molecular Weight (calculated) 37936.10 Da
IEP (calculated) 8.73
GRAVY (calculated) -0.29
Length 349 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGVSFLSTV PSFTNTTNHQ HLTTLSSSSH RSAVIRCSKI EPQVSGESLA FHRRDVLKLA GTAVGMELIG NGFINNVGDA KAADLNQRRQ RSEFQSKIKI
101: LLSTTIKAKP ELVPSLLKLA LNDAMTYDKA TKSGGANGSI RFSSELSRAE NEGLSDGLSL IEEVKKEIDS ISKGGPISYA DIIQLAGQSA VKFTYLASAI
201: RKCGGNEEKG NLLYTAYGSA GQWGLFDRNF GRSDATEADP EGRVPQWGKA TVQEMKDKFI AVGLGPRQLA VMSAFLGPDQ AATEQLLATD PQVAPWVQKY
301: QRSRETVSQT DYEVDLITAF TKLSCLGQQI NFEAYTYPVE RINLSKLKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)