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AT4G08850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26748395 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:24030099 (2013): plasma membrane
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:19000159 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein with leucine-rich repeat domain (TAIR:AT1G35710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G08850-MONOMERBioCyc:ARA:GQT-50-MONOMERBioGrid:11755EC:2.7.11.1
eggNOG:COG4886eggNOG:KOG0619EMBL:AF083700EMBL:AK317056
EMBL:AL161513EMBL:AL161813EMBL:AY064972EMBL:CP002687
EMBL:FJ708744EnsemblPlants:AT4G08850EnsemblPlants:AT4G08850.1entrez:826456
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:826456Genevisible:Q8VZG8
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0009506
GO:GO:0016020GO:GO:0016021GO:GO:0090406hmmpanther:PTHR27000
hmmpanther:PTHR27000:SF190HOGENOM:HOG000116551InParanoid:Q8VZG8IntAct:Q8VZG8
InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008266
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441
InterPro:IPR032675iPTMnet:Q8VZG8KEGG:ath:AT4G08850OMA:EVIKGEH
PaxDb:Q8VZG8Pfam:PF00069Pfam:PF00560Pfam:PF08263
Pfam:PF13855Pfam:Q8VZG8Pfscan:PS50011Pfscan:PS51450
PhylomeDB:Q8VZG8PIR:B85089PRIDE:Q8VZG8PRO:PR:Q8VZG8
PROSITE:PS00107PROSITE:PS00109PROSITE:PS50011PROSITE:PS51450
ProteinModelPortal:Q8VZG8Proteomes:UP000006548RefSeq:NP_192625.4RefSeq:NP_849538.2
scanprosite:PS00107scanprosite:PS00109SMART:SM00369SMR:Q8VZG8
STRING:3702.AT4G08850.1SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
SwissPalm:Q8VZG8TAIR:AT4G08850TMHMM:TMhelixUniGene:At.19749
UniGene:At.47927UniGene:At.67694UniProt:Q8VZG8
Coordinates (TAIR10) chr4:-:5636693..5640496
Molecular Weight (calculated) 115429.00 Da
IEP (calculated) 6.20
GRAVY (calculated) -0.19
Length 1045 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNKTNPERKI SLTSFKERMA CKEKPRDLQV LLIISIVLSC SFAVSATVEE ANALLKWKST FTNQTSSSKL SSWVNPNTSS FCTSWYGVAC SLGSIIRLNL
0101: TNTGIEGTFE DFPFSSLPNL TFVDLSMNRF SGTISPLWGR FSKLEYFDLS INQLVGEIPP ELGDLSNLDT LHLVENKLNG SIPSEIGRLT KVTEIAIYDN
0201: LLTGPIPSSF GNLTKLVNLY LFINSLSGSI PSEIGNLPNL RELCLDRNNL TGKIPSSFGN LKNVTLLNMF ENQLSGEIPP EIGNMTALDT LSLHTNKLTG
0301: PIPSTLGNIK TLAVLHLYLN QLNGSIPPEL GEMESMIDLE ISENKLTGPV PDSFGKLTAL EWLFLRDNQL SGPIPPGIAN STELTVLQLD TNNFTGFLPD
0401: TICRGGKLEN LTLDDNHFEG PVPKSLRDCK SLIRVRFKGN SFSGDISEAF GVYPTLNFID LSNNNFHGQL SANWEQSQKL VAFILSNNSI TGAIPPEIWN
0501: MTQLSQLDLS SNRITGELPE SISNINRISK LQLNGNRLSG KIPSGIRLLT NLEYLDLSSN RFSSEIPPTL NNLPRLYYMN LSRNDLDQTI PEGLTKLSQL
0601: QMLDLSYNQL DGEISSQFRS LQNLERLDLS HNNLSGQIPP SFKDMLALTH VDVSHNNLQG PIPDNAAFRN APPDAFEGNK DLCGSVNTTQ GLKPCSITSS
0701: KKSHKDRNLI IYILVPIIGA IIILSVCAGI FICFRKRTKQ IEEHTDSESG GETLSIFSFD GKVRYQEIIK ATGEFDPKYL IGTGGHGKVY KAKLPNAIMA
0801: VKKLNETTDS SISNPSTKQE FLNEIRALTE IRHRNVVKLF GFCSHRRNTF LVYEYMERGS LRKVLENDDE AKKLDWGKRI NVVKGVAHAL SYMHHDRSPA
0901: IVHRDISSGN ILLGEDYEAK ISDFGTAKLL KPDSSNWSAV AGTYGYVAPE LAYAMKVTEK CDVYSFGVLT LEVIKGEHPG DLVSTLSSSP PDATLSLKSI
1001: SDHRLPEPTP EIKEEVLEIL KVALLCLHSD PQARPTMLSI STAFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)