AT4G08730.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:peroxisome 0.385 cytosol 0.262 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : RNA-binding protein | ||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
RNA-binding protein; Has 57 Blast hits to 57 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:5577390..5578779 | ||||||||||||||||
Molecular Weight (calculated) | 20235.70 Da | ||||||||||||||||
IEP (calculated) | 7.80 | ||||||||||||||||
GRAVY (calculated) | 0.09 | ||||||||||||||||
Length | 188 amino acids | ||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEGFTNFLQV METKVDLLAR KVDLLTSKMD LCATNVDLLT SKMNLCATNS DLKAMLTSMK GKNVPAKKTL AMAASDSEDS SDSSSSDDIE LCFRFLIKIV 101: IQLRPSYFII IFAYIDLKEG ANKALELNGS DMAGKELVVK TALLMRDSYL GYSCNGGIGG RFGGRFGSVG GIFGGGRCGG LGQYYAQV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)