AT4G07670.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.767 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protease-associated (PA) domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protease-associated (PA) domain-containing protein; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT5G19740.1); Has 1547 Blast hits to 1542 proteins in 265 species: Archae - 2; Bacteria - 277; Metazoa - 551; Fungi - 328; Plants - 113; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:4462911..4464256 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 31117.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.86 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||
| Length | 280 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTLSQVSLV VYANYGRVED FVRLKKDMGV NVSGAVVIAR YGQIYKVDIV NNAYEAGAVG VVIYTNKRDY GGDEWFPASK WMPPSGFQVG TVYNGLGDPT 101: TPGWASVDGC ERLSDEAVEL SGDVPLIPSL PVSAADAEVI LKTIVGDVGP GPGILNLSYI VTKIQNVIGV IEGEEEPDRY VILRNHRDTW TFRAVDPNSG 201: TAVLMEASKS YLQHIAQRLD KLQKRGWKPR RTIILCNWDA EEYGLVSSLS EISYWLFFFI IVYTNTSNIS LKLHWKQNES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)