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AT4G04880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : adenosine/AMP deaminase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G04880-MONOMEReggNOG:COG1816eggNOG:KOG1097EMBL:AY099563
EMBL:BT001246EMBL:CP002687EnsemblPlants:AT4G04880EnsemblPlants:AT4G04880.1
entrez:825826GeneID:825826GO:GO:0019239Gramene:AT4G04880.1
hmmpanther:PTHR11409hmmpanther:PTHR11409:SF42HOGENOM:HOG000205847InterPro:IPR001365
InterPro:IPR032466KEGG:ath:AT4G04880KO:K01488ncoils:Coil
OMA:IEHSMTAPfam:PF00962PhylomeDB:Q8LPL7Proteomes:UP000006548
Reactome:R-ATH-2161541Reactome:R-ATH-74217RefSeq:NP_192397.2SMR:Q8LPL7
STRING:3702.AT4G04880.1SUPFAM:SSF51556TAIR:AT4G04880UniGene:At.33946
UniProt:Q8LPL7
Coordinates (TAIR10) chr4:-:2465055..2467103
Molecular Weight (calculated) 39951.00 Da
IEP (calculated) 6.02
GRAVY (calculated) -0.09
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MEWIQSLPKI ELHAHLNGSI RDSTLLELAR VLGEKGVIVF ADVEHVIQKN DRSLVEVFKL FDLIHKLTTD HKTVTRITRE VVEDFALENV VYLELRTTPK
101: RSDSIGMSKR SYMEAVIQGL RSVSEVDIDF VTASDSQKLH NAGDGIGRKK IYVRLLLSID RRETTESAME TVKLALEMRD VGVVGIDLSG NPLVGEWSTF
201: LPALQYAKDN DLHITLHCGE VPNPKEIQAM LDFKPHRIGH ACFFKDEDWT KLKSFRIPVE ICLTSNIVTK SISSIDIHHF ADLYNAKHPL ILCTDDFGVF
301: STSLSNEYAL AVRSLGLSKS ETFALARAAI DATFAEDEVK QQLRFIFDSA SPEHV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)