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AT4G04840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.946
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methionine sulfoxide reductase B6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methionine sulfoxide reductase B6 (MSRB6); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B9 (TAIR:AT4G21850.1); Has 8335 Blast hits to 8332 proteins in 2250 species: Archae - 76; Bacteria - 4945; Metazoa - 267; Fungi - 135; Plants - 207; Viruses - 1; Other Eukaryotes - 2704 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G04840-MONOMEREC:1.8.4.12eggNOG:COG0229eggNOG:KOG0856EMBL:AF118223EMBL:AK118878EMBL:AL161501
EMBL:BT005459EMBL:CP002687EnsemblPlants:AT4G04840EnsemblPlants:AT4G04840.1entrez:825821Gene3D:2.170.150.20GeneID:825821
Genevisible:Q8GWF4GO:GO:0005829GO:GO:0006979GO:GO:0030091GO:GO:0033743GO:GO:0046872Gramene:AT4G04840.1
hmmpanther:PTHR10173hmmpanther:PTHR10173:SF19HOGENOM:HOG000243424InParanoid:Q8GWF4InterPro:IPR002579InterPro:IPR011057InterPro:IPR028427
KEGG:ath:AT4G04840KO:K07305OMA:KSNEEWRPANTHER:PTHR10173PaxDb:Q8GWF4Pfam:PF01641Pfam:Q8GWF4
PhylomeDB:Q8GWF4PIR:H85060PRIDE:Q8GWF4PRO:PR:Q8GWF4PROSITE:PS51790ProteinModelPortal:Q8GWF4Proteomes:UP000006548
Reactome:R-ATH-5676934RefSeq:NP_192393.2SMR:Q8GWF4STRING:3702.AT4G04840.1SUPFAM:SSF51316TAIR:AT4G04840tair10-symbols:ATMSRB6
tair10-symbols:MSRB6TIGRfam:TIGR00357TIGRFAMs:TIGR00357UniGene:At.33953UniProt:Q8GWF4
Coordinates (TAIR10) chr4:+:2449659..2451302
Molecular Weight (calculated) 17098.40 Da
IEP (calculated) 7.27
GRAVY (calculated) -0.54
Length 153 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTSPKMEME MKMETKAAPE AGMIKKSNEE WRTVLSPEQF KILREKSIEK RGSGEYVKLF EEGIYCCVGC GNPVYKSTTK FDSGCGWPAF FDAIPGAINR
101: TEERAGLRYE ITCTKCDGHL GHVLKNEGFP TPTDERHCVN SVALKFSSAI TSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)