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AT4G04570.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.821
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 40
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 40 (CRK40); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 39 (TAIR:AT4G04540.1); Has 125358 Blast hits to 123774 proteins in 4712 species: Archae - 112; Bacteria - 14520; Metazoa - 45965; Fungi - 10999; Plants - 34725; Viruses - 448; Other Eukaryotes - 18589 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G04570-MONOMERBioCyc:ARA:GQT-702-MONOMERBioGrid:11100EC:2.7.11.-eggNOG:COG0515eggNOG:ENOG410JT8PEMBL:AF074021
EMBL:AL161501EMBL:AY127017EMBL:CP002687EnsemblPlants:AT4G04570EnsemblPlants:AT4G04570.1entrez:825789ExpressionAtlas:Q9SYS3
Gene3D:2.60.120.200GeneID:825789Genevisible:Q9SYS3GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006468
GO:GO:0009506GO:GO:0016021GO:GO:0042742hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q9SYS3IntAct:Q9SYS3
InterPro:IPR000719InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441OMA:QSESGAM
PaxDb:Q9SYS3Pfam:PF00069Pfam:PF01657Pfam:Q9SYS3Pfscan:PS50011Pfscan:PS51473PhylomeDB:Q9SYS3
PIR:F85057PRIDE:Q9SYS3PRO:PR:Q9SYS3PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473
ProteinModelPortal:Q9SYS3Proteomes:UP000006548RefSeq:NP_192366.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SYS3
STRING:3702.AT4G04570.1SUPFAM:SSF56112TAIR:AT4G04570tair10-symbols:CRK40TMHMM:TMhelixUniGene:At.33996UniProt:Q9SYS3
Coordinates (TAIR10) chr4:+:2290045..2292717
Molecular Weight (calculated) 73239.80 Da
IEP (calculated) 6.33
GRAVY (calculated) -0.17
Length 654 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKCSALMIF LSSSLLLVLQ TLHVVNAVKC FGNSFNGNSS TFAQNRQKLF PTLADKVIIN DGFYNASLGQ DPDKVYALVS CARGYDQDAC YNCVQSLTQN
101: TLTDCRSRRD SFIWGGNDDV TCLVRSSNQS TFGSVQLKPP VVWPSPDTIE SSKNITLFKQ QWEEMVNRTL EAATKAEGSS VLKYYKAEKA GFTEFPDVYM
201: LMQCTPDLSS RDCKQCLGDC VMYFRKDYMG RKGGMASLPS CYFRWDLYSF HNAFDNVTRV PAPPPRPHAQ EKESCITVKK GKSIGYGGII AIVVVFTFIN
301: LLVFIGFIKV YARRGKLNNV GSAEYSDSDG QFMLRFDLGM IVMATDDFSS ENTLGQGGFG TVYKGTFPNG QEVAVKRLTK GSGQGDMEFK NEVSLLTRLQ
401: HKNLVKLLGF CNEGDEEILV YEFVPNSSLD HFIFDEDKRS LLTWEVRFRI IEGIARGLLY LHEDSQLKII HRDLKASNIL LDAEMNPKVA DFGTARLFDS
501: DETRAETKRI AGTRGYMAPE YLNHGQISAK SDVYSFGVML LEMISGERNN SFEGEGLAAF AWKRWVEGKP EIIIDPFLIE NPRNEIIKLI QIGLLCVQEN
601: STKRPTMSSV IIWLGSETII IPLPKAPAFT WIRSQSESGA MSLSDDVFTE LSCR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)