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AT4G03740.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWF0eggNOG:ENOG41104ZUEMBL:AC005142EMBL:AL161497
EMBL:CP002687EnsemblPlants:AT4G03740EnsemblPlants:AT4G03740.1entrez:825675
GeneID:825675Gramene:AT4G03740.1KEGG:ath:AT4G03740OMA:QCGFDEL
PhylomeDB:Q9SY52PIR:D85047Proteomes:UP000006548RefSeq:NP_192283.1
TAIR:AT4G03740UniGene:At.54123UniProt:Q9SY52
Coordinates (TAIR10) chr4:-:1661992..1663515
Molecular Weight (calculated) 40282.40 Da
IEP (calculated) 9.73
GRAVY (calculated) -0.69
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIEELVQQP GRTLLRRLHP KRLEGSTWFG FSKNGIFKSI LRMLHGMLKH PYPTYNDMPR NNQEIWFRTF ALGSCPHTLW PCWVSQVCCI KIFRPHEHLE
101: RKVGSRRVSK RLEPRHMASL QRVLSVAGDC LYRENQLKIS EKRMWWQRYD GAQCGFDELL KPYKRIENNG GVEPDFVEII EDTHTNKKAG LIQDGYIAGL
201: VETQLPQNDD GSSPSNVQTR EKINRMVFEE IPPNRGRVIE LGSLNQSTRY FYAGPSRDSD IFAELEEKDK EILVLKEQNM KILDFMRSKF SDFPNDPLEI
301: RTTSVTRRKY IVGNHSGITL WGNRQKNIPT NFQQRSDAMP VNNIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)