AT4G03610.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.823 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Metallo-hydrolase/oxidoreductase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Metallo-hydrolase/oxidoreductase superfamily protein; BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1); Has 2341 Blast hits to 2330 proteins in 693 species: Archae - 12; Bacteria - 1231; Metazoa - 0; Fungi - 21; Plants - 106; Viruses - 0; Other Eukaryotes - 971 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:1605039..1606917 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34025.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.51 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||
| Length | 303 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKNQSDDDG TALIFLGTGC SGAVPDFRCL LQPSDPPCHV CSQSLSLLPH LNPNYRCNTS LLIDYCSKEE DGRHKYILID VGKSFREQII LTHEHADAVH 101: GLDEIRSLQP RGATIVDTDP LPVFLSQFTM ESIATRFPYL VEKKVKEVPR RVSLLDWKNI EENCDEPFAA SGLSFTPLPV MHGEDYIALG FLFGDKSKVA 201: YISDVSRIPP STEYAISKAG AGQLDLLILD TNIPWKRGPH PTHICFTEAL EILKRLCPKR ALLTGMTHEF DHHEYNEILA EWSLREGIHV QLAHDGLRLP 301: IDL |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)