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AT4G03550.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24561766 (2014): extracellular region plant-type cell wall
  • PMID:23335625 (2013): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:26748395 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22430844 (2012): Golgi
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glucan synthase-like 5
Curator
Summary (TAIR10)
Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.
Computational
Description (TAIR10)
glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G03550-MONOMERBioGrid:10964CAZy:GT48EC:2.4.1.34eggNOG:ENOG410XQ8VeggNOG:KOG0916EMBL:AC005142
EMBL:AF071527EMBL:AL161497EMBL:CP002687EnsemblPlants:AT4G03550EnsemblPlants:AT4G03550.1entrez:825650ExpressionAtlas:Q9ZT82
GeneID:825650Genevisible:Q9ZT82GO:GO:0000003GO:GO:0000148GO:GO:0003843GO:GO:0005794GO:GO:0005886
GO:GO:0006075GO:GO:0006952GO:GO:0008360GO:GO:0009506GO:GO:0009555GO:GO:0009620GO:GO:0009863
GO:GO:0009870GO:GO:0009965GO:GO:0010150GO:GO:0016021GO:GO:0042742GO:GO:0050832GO:GO:0052542
GO:GO:0052544Gramene:AT4G03550.1hmmpanther:PTHR12741hmmpanther:PTHR12741:SF14HOGENOM:HOG000029513InParanoid:Q9ZT82InterPro:IPR003440
InterPro:IPR026899iPTMnet:Q9ZT82KEGG:00500+2.4.1.34KEGG:ath:AT4G03550KO:K11000ncoils:CoilOMA:ELWNVRV
PaxDb:Q9ZT82Pfam:PF02364Pfam:PF14288Pfam:Q9ZT82PhylomeDB:Q9ZT82PIR:A85045PRIDE:Q9ZT82
PRO:PR:Q9ZT82ProteinModelPortal:Q9ZT82Proteomes:UP000006548RefSeq:NP_192264.1SMART:SM01205STRING:3702.AT4G03550.1TAIR:AT4G03550
tair10-symbols:ATGSL05tair10-symbols:ATGSL5tair10-symbols:GSL05tair10-symbols:GSL5tair10-symbols:PMR4TMHMM:TMhelixUniGene:At.3956
UniProt:Q9ZT82UniProt:W8PV73
Coordinates (TAIR10) chr4:+:1573513..1579195
Molecular Weight (calculated) 206924.00 Da
IEP (calculated) 9.25
GRAVY (calculated) -0.03
Length 1780 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSLRHRTVPP QTGRPLAAEA VGIEEEPYNI IPVNNLLADH PSLRFPEVRA AAAALKTVGD LRRPPYVQWR SHYDLLDWLA LFFGFQKDNV RNQREHMVLH
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)