AT4G03230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-locus lectin protein kinase family protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:1419278..1422828 | ||||||||||||||||||||
| Molecular Weight (calculated) | 113561.00 Da | ||||||||||||||||||||
| IEP (calculated) | 6.03 | ||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||
| Length | 1010 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MILSVFFYMF LLHIRRLDCF VAVQDSKTLF KGSTLINDSH GETLVSAGQR FELGFFTPNG SSDERRYLGI WFYNLHPLTV VWVANRESPV LDRSCIFTIS 0101: KDGNLEVIDS KGRVYWDTGV KPSSVSAERM VKLMDNGNLV LISDGNEANV VWQSFQNPTD TFLPGMRMDE NMTLSSWRSF NDPSHGNFTF QMDQEEDKQF 0201: IIWKRSMRYW KSGISGKFIG SDEMPYAISY FLSNFTETVT VHNASVPPLF TSLYTNTRFT MSSSGQAQYF RLDGERFWAQ IWAEPRDECS VYNACGNFGS 0301: CNSKNEEMCK CLPGFRPNFL EKWVKGDFSG GCSRESRICG KDGVVVGDMF LNLSVVEVGS PDSQFDAHNE KECRAECLNN CQCQAYSYEE VDILQSNTKC 0401: WIWLEDLNNL KEGYLGSRNV FIRVAVPDIE STSRDCVTCG TNIIPYPLST APGCGDSNYL SFNCNMSTGQ VIFKGSNSSY NITSINPDTR RFLIKIKDVV 0501: VNCTTVNQIS RLSELKLSSP FHLTGKCNAD TVTGGTEVEI RWDPPLEPTC SLSADCKDWP NSSCSKSGEG KKQCFCNHDF KWNGFNLNCT QERGRGRYGE 0601: AKTPVVLIIV VTFTSAAILV VLSSTASYVF LQRRKVNKEL GSIPRGVHLC DSERHIKELI ESGRFKQDDS QGIDVPSFEL ETILYATSNF SNANKLGQGG 0701: FGPVYKGMFP GDQEIAVKRL SRCSGQGLEE FKNEVVLIAK LQHRNLVRLL GYCVAGEEKL LLYEYMPHKS LDFFIFDRKL CQRLDWKMRC NIILGIARGL 0801: LYLHQDSRLR IIHRDLKTSN ILLDEEMNPK ISDFGLARIF GGSETSANTN RVVGTYGYMS PEYALEGLFS FKSDVFSFGV VVIETISGKR NTGFHEPEKS 0901: LSLLGHAWDL WKAERGIELL DQALQESCET EGFLKCLNVG LLCVQEDPND RPTMSNVVFM LGSSEAATLP TPKQPAFVLR RCPSSSKASS STKPETCSEN 1001: ELTITLEDGR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)