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AT4G03040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.965
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G33330.1); Has 18 Blast hits to 18 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AF069442EMBL:AL161495EMBL:CP002687EnsemblPlants:AT4G03040
EnsemblPlants:AT4G03040.1entrez:828107GeneID:828107Gramene:AT4G03040.1
KEGG:ath:AT4G03040PIR:T01389Proteomes:UP000006548RefSeq:NP_192213.1
TAIR:AT4G03040UniGene:At.54105UniProt:Q9ZTA0
Coordinates (TAIR10) chr4:+:1341083..1343140
Molecular Weight (calculated) 10381.70 Da
IEP (calculated) 6.50
GRAVY (calculated) -0.09
Length 92 amino acids
Sequence (TAIR10)
(BLAST)
1: MNLEERIMVN IFVPKNETIK RHYKEVYDTT LSPLKQDSKA GICLILTDSH GKYILKGCSS IEPTNSALEA EAIALKEALL QVKCLQYQDV IL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)