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AT4G02680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.911
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ETO1-like 1
Curator
Summary (TAIR10)
Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5.
Computational
Description (TAIR10)
ETO1-like 1 (EOL1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT3G51770.1); Has 651 Blast hits to 563 proteins in 153 species: Archae - 10; Bacteria - 244; Metazoa - 131; Fungi - 2; Plants - 163; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
BioGrid:13494eggNOG:ENOG410II32eggNOG:ENOG410ZP3VEMBL:AC002330EMBL:AK229195EMBL:AL161495EMBL:AY572792
EMBL:CP002687EnsemblPlants:AT4G02680EnsemblPlants:AT4G02680.1entrez:828205Gene3D:1.25.40.10GeneID:828205Genevisible:Q9ZQX6
GO:GO:0005622GO:GO:0009873GO:GO:0010364GO:GO:0016567Gramene:AT4G02680.1hmmpanther:PTHR23083hmmpanther:PTHR23083:SF430
HOGENOM:HOG000242159InParanoid:Q9ZQX6IntAct:Q9ZQX6InterPro:IPR011333InterPro:IPR011990InterPro:IPR019734KEGG:ath:AT4G02680
ncoils:CoilOMA:VENWTTAPaxDb:Q9ZQX6Pfam:PF00515Pfam:PF13371Pfam:Q9ZQX6PhylomeDB:Q9ZQX6
PIR:T01081PRIDE:Q9ZQX6PRO:PR:Q9ZQX6ProteinModelPortal:Q9ZQX6Proteomes:UP000006548RefSeq:NP_192177.1SMART:SM00028
SMR:Q9ZQX6STRING:3702.AT4G02680.1SUPFAM:SSF48452SUPFAM:SSF54695TAIR:AT4G02680tair10-symbols:EOL1UniGene:At.3897
UniPathway:UPA00143UniProt:Q9ZQX6
Coordinates (TAIR10) chr4:-:1181202..1184328
Molecular Weight (calculated) 101049.00 Da
IEP (calculated) 5.59
GRAVY (calculated) -0.26
Length 888 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)