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AT4G02640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : bZIP transcription factor family protein
Curator
Summary (TAIR10)
Encodes a basic leucine zipper (bZIP) transcription factor AtbZIP10. AtbZIP10 shuttles between the nucleus and the cytoplasm. It binds consensus G- and C-box DNA sequences. AtbZIP10 acts antagonistically with LSD1 in both pathogen-induced hypersensitive response and basal defense responses.
Computational
Description (TAIR10)
BZO2H1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2464 Blast hits to 2453 proteins in 235 species: Archae - 2; Bacteria - 9; Metazoa - 253; Fungi - 131; Plants - 1940; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Protein Annotations
BioGrid:13508eggNOG:ENOG410JW8EeggNOG:ENOG4110561EMBL:AC002330EMBL:AF310222EMBL:AJ010859EMBL:AK318728
EMBL:AL161494EMBL:AY080854EMBL:AY088417EMBL:BT025558EMBL:CP002687EnsemblPlants:AT4G02640EnsemblPlants:AT4G02640.1
entrez:828219GeneID:828219Genevisible:O22763GO:GO:0002240GO:GO:0003700GO:GO:0005634GO:GO:0005737
GO:GO:0006351GO:GO:0006355GO:GO:0009626GO:GO:0043565GO:GO:0045735GO:GO:0045893GO:GO:0046982
GO:GO:2000693hmmpanther:PTHR22952hmmpanther:PTHR22952:SF127HOGENOM:HOG000240492InParanoid:O22763IntAct:O22763InterPro:IPR004827
InterPro:IPR020983iPTMnet:O22763KEGG:ath:AT4G02640ncoils:CoilOMA:GQNDFEDPaxDb:O22763Pfam:O22763
Pfam:PF00170Pfam:PF12498Pfscan:PS50217PhylomeDB:O22763PIR:T01085PRIDE:O22763PRO:PR:O22763
PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:O22763Proteomes:UP000006548RefSeq:NP_192173.1RefSeq:NP_849290.1scanprosite:PS00036
SMART:SM00338SMR:O22763STRING:3702.AT4G02640.2SUPFAM:SSF57959TAIR:AT4G02640tair10-symbols:ATBZIP10tair10-symbols:BZO2H1
UniGene:At.25176UniProt:O22763
Coordinates (TAIR10) chr4:+:1154031..1156085
Molecular Weight (calculated) 45360.50 Da
IEP (calculated) 5.10
GRAVY (calculated) -0.85
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSIFSIDDF SDPFWETPPI PLNPDSSKPV TADEVSQSQP EWTFEMFLEE ISSSAVSSEP LGNNNNAIVG VSSAQSLPSV SGQNDFEDDS RFRDRDSGNL
101: DCAAPMTTKT VIVDSDDYRR VLKNKLETEC ATVVSLRVGS VKPEDSTSSP ETQLQPVQSS PLTQGELGVT SSLPAEVKKT GVSMKQVTSG SSREYSDDED
201: LDEENETTGS LKPEDVKKSR RMLSNRESAR RSRRRKQEQT SDLETQVNDL KGEHSSLLKQ LSNMNHKYDE AAVGNRILKA DIETLRAKVK MAEETVKRVT
301: GMNPMLLGRS SGHNNNNRMP ITGNNRMDSS SIIPAYQPHS NLNHMSNQNI GIPTILPPRL GNNFAAPPSQ TSSPLQRIRN GQNHHVTPSA NPYGWNTEPQ
401: NDSAWPKKCV D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)