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AT4G02340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G02340-MONOMEReggNOG:COG0596eggNOG:KOG4178EMBL:AF069298EMBL:AL161494EMBL:AY102100EMBL:BT000552
EMBL:CP002687EnsemblPlants:AT4G02340EnsemblPlants:AT4G02340.1entrez:828063ESTHER:arath-T14P8.15Gene3D:3.40.50.1820GeneID:828063
GO:GO:0005777GO:GO:0016787Gramene:AT4G02340.1hmmpanther:PTHR10992hmmpanther:PTHR10992:SF811HOGENOM:HOG000028073InterPro:IPR000073
InterPro:IPR000639InterPro:IPR029058KEGG:ath:AT4G02340merops:S33.971OMA:MAETITHPfam:PF12697PhylomeDB:O81299
PIR:T01316PRINTS:PR00111PRINTS:PR00412PRO:PR:O81299Proteomes:UP000006548Reactome:R-ATH-2142670RefSeq:NP_567228.1
SMR:O81299STRING:3702.AT4G02340.1SUPFAM:SSF53474TAIR:AT4G02340UniGene:At.3881UniProt:O81299
Coordinates (TAIR10) chr4:+:1035722..1037403
Molecular Weight (calculated) 36658.90 Da
IEP (calculated) 6.74
GRAVY (calculated) -0.14
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)