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AT4G02150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ARM repeat superfamily protein
Curator
Summary (TAIR10)
Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational
Description (TAIR10)
MODIFIER OF SNC1, 6 (MOS6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, defense response; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.1); Has 4718 Blast hits to 3432 proteins in 305 species: Archae - 4; Bacteria - 22; Metazoa - 2034; Fungi - 556; Plants - 1321; Viruses - 0; Other Eukaryotes - 781 (source: NCBI BLink).
Protein Annotations
BioGrid:12765eggNOG:COG5064eggNOG:KOG0166EMBL:AF001308EMBL:AF385693EMBL:AL161493EMBL:AY081725
EMBL:CP002687EMBL:DQ087970EMBL:Y09511EMBL:Y15225EnsemblPlants:AT4G02150EnsemblPlants:AT4G02150.1entrez:827472
Gene3D:1.25.10.10GeneID:827472Genevisible:O04294GO:GO:0005634GO:GO:0005643GO:GO:0005654GO:GO:0005829
GO:GO:0006607GO:GO:0006952GO:GO:0008139GO:GO:0008565Gramene:AT4G02150.1HOGENOM:HOG000167616InParanoid:O04294
IntAct:O04294InterPro:IPR000225InterPro:IPR002652InterPro:IPR011989InterPro:IPR016024InterPro:IPR024931InterPro:IPR032413
KEGG:ath:AT4G02150OMA:NDENHAPPaxDb:O04294PDB:4TNMPDBsum:4TNMPfam:O04294Pfam:PF00514
Pfam:PF01749Pfam:PF16186Pfscan:PS50176Pfscan:PS51214PhylomeDB:O04294PIR:T01516PIR:T52099
PIRSF:PIRSF005673PRIDE:O04294PRO:PR:O04294PROSITE:PS50176PROSITE:PS51214ProteinModelPortal:O04294Proteomes:UP000006548
RefSeq:NP_192124.1SMART:SM00185SMR:O04294STRING:3702.AT4G02150.1SUPFAM:SSF48371TAIR:AT4G02150tair10-symbols:ATIMPALPHA3
tair10-symbols:IMPA-3tair10-symbols:MOS6UniGene:At.5372UniProt:O04294
Coordinates (TAIR10) chr4:-:950884..953602
Molecular Weight (calculated) 58619.50 Da
IEP (calculated) 4.53
GRAVY (calculated) -0.29
Length 531 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLRPSAKTE VRRNRYKVAV DAEEGRRRRE DNLVEIRKNK REENLQKKRF TSSMAFGSAT GQTEQDLSSA NQLKDNLPAM VAGIWSEDSN SQLEATNLLR
101: KLLSIEQNPP INEVVQSGVV PRVVKFLSRD DFPKLQFEAA WALTNIASGT SENTNVIIES GAVPIFIQLL SSASEDVREQ AVWALGNVAG DSPKCRDLVL
201: SYGAMTPLLS QFNENTKLSM LRNATWTLSN FCRGKPPPAF EQTQPALPVL ERLVQSMDEE VLTDACWALS YLSDNSNDKI QAVIEAGVVP RLIQLLGHSS
301: PSVLIPALRT IGNIVTGDDL QTQMVLDQQA LPCLLNLLKN NYKKSIKKEA CWTISNITAG NADQIQAVID AGIIQSLVWV LQSAEFEVKK EAAWGISNAT
401: SGGTHDQIKF MVSQGCIKPL CDLLTCPDLK VVTVCLEALE NILVVGEAEK NLGHTGEDNL YAQMIDEAEG LEKIENLQSH DNNDIYDKAV KILETFWTED
501: NEEEGNDENH APQSGFQFGS TNVPPGQFNF I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)