AT4G01720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WRKY family transcription factor | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of WRKY Transcription Factor; Group II-b | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
WRKY47; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3605 Blast hits to 3148 proteins in 215 species: Archae - 2; Bacteria - 4; Metazoa - 47; Fungi - 10; Plants - 3482; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:744949..748219 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53710.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.01 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||||||||||||||
| Length | 489 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEHIQDRRE IAFLHSGEFL HGDSDSKDHQ PNESPVERHH ESSIKEVDFF AAKSQPFDLG HVRTTTIVGS SGFNDGLGLV NSCHGTSSND GDDKTKTQIS 101: RLKLELERLH EENHKLKHLL DEVSESYNDL QRRVLLARQT QVEGLHHKQH EDVPQAGSSQ ALENRRPKDM NHETPATTLK RRSPDDVDGR DMHRGSPKTP 201: RIDQNKSTNH EEQQNPHDQL PYRKARVSVR ARSDATTVND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILTTTY EGNHNHPLPP 301: SATAMAATTS AAAAMLLSGS SSSNLHQTLS SPSATSSSSF YHNFPYTSTI ATLSASAPFP TITLDLTNPP RPLQPPPQFL SQYGPAAFLP NANQIRSMNN 401: NNQQLLIPNL FGPQAPPREM VDSVRAAIAM DPNFTAALAA AISNIIGGGN NDNNNNTDIN DNKVDAKSGG SSNGDSPQLP QSCTTFSTN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)