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AT4G01430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.955
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G01070.1); Has 2489 Blast hits to 2481 proteins in 402 species: Archae - 14; Bacteria - 1085; Metazoa - 6; Fungi - 8; Plants - 1212; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
Protein Annotations
BioGrid:11984EMBL:AF069300EMBL:AK220882EMBL:AL161492EMBL:AY093220EMBL:BT002126EMBL:BX828792
EMBL:CP002687EnsemblPlants:AT4G01430EnsemblPlants:AT4G01430.1entrez:826685GeneID:826685Genevisible:Q9M131GO:GO:0005886
GO:GO:0006810GO:GO:0006868GO:GO:0015186GO:GO:0016021GO:GO:0022857GO:GO:0044746GO:GO:0048316
hmmpanther:PTHR31218hmmpanther:PTHR31218:SF10HOGENOM:HOG000237441InParanoid:Q9M131IntAct:Q9M131InterPro:IPR000620InterPro:IPR030184
KEGG:ath:AT4G01430OMA:ICIMGAMPANTHER:PTHR31218PaxDb:Q9M131Pfam:PF00892Pfam:Q9M131PhylomeDB:Q9M131
PIR:F85018PIR:T01374PRO:PR:Q9M131ProteinModelPortal:Q9M131Proteomes:UP000006548RefSeq:NP_192052.1RefSeq:NP_974494.2
STRING:3702.AT4G01430.1SUPFAM:0043518TAIR:AT4G01430TMHMM:TMhelixUniGene:At.23231UniProt:Q9M131
Coordinates (TAIR10) chr4:+:585707..587846
Molecular Weight (calculated) 40460.10 Da
IEP (calculated) 9.55
GRAVY (calculated) 0.44
Length 365 amino acids
Sequence (TAIR10)
(BLAST)
001: MMKEEQWAPV IVMLISSVAM GSVNALVKKA LDVGVNHMIF GAYRMAISAL ILVPFSYIWE RKTRPQLTFM LLCEHFISGL LGASLMQFFF LLGLSYTSAT
101: VSMALVSMLP AITFALALIF RIENAQNLKS KAGVLKVMGT LICIMGAMLL TFYKGPELSN PHSHPQARHN NNNNNGHDQT KKWLLGCLYL VIGTVLLSLW
201: MLFQGKLSFK YPGNKYSSTC LMSVFASFQC AILSLYKSRD VKDWIIEDKF VILVTLYAGI VGQAMSTVVT SWSIKMTGAV FVSTFSPVSL VAATLFDFLI
301: LHSPLYLGSI LGSVVTITGL YVFLWGRKNE TDQSVSKTLN SSQFSQNKDN EDHTIANHKD TNLPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)