AT4G01240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05390.1); Has 456 Blast hits to 442 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 455; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:517795..521972 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75165.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.38 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 659 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEDVVVVVV EEREMSETNL EELWDQLHYA IRALKALRFD NTMRQKAIDK LIALQEKESI ASNEECIARE VVQEATLELS LGEARLQQVL VESAGHNASE 101: VEDKVWETMI LGEKAVELER DTTQDAQGQV LVGKSTVVDE DAISSGVAEN ELAVDEIYTC EASFSMKKKK PIIVVIILFM MFVSDLFRFA PVESLELAKP 201: CFPSPSLAFL ISVATLAKFN YITPLRFSDR FCNYHGSFDG DNYNIGSQMR KTIETAIFKI HQEMDDLKAL EANSSTPPSS VSSASGSMFR HVAFLADVLS 301: LVQSVHMELP SFEERSVADH PLKQQKGDPG EHFMREEIKK YIKIKPNRLG KQNFMGANGT FTSIGHACFA MKKDLEEYMD YDVGEICNDD WRLAQKLMVH 401: GCDPLPRRRC FSRGPQLYHK PFPINESLWK LPDNRNVRWG QYKCKNFACL ASNTTARKGF FKCTDCFNLT HHESPRWLNR GEIDPETNQT ADFSIAEVLE 501: IKPGEIRIGL DFSIGTGTFA ARMREQNVTI VSATINLGAP FNEMIALRGL VPLYLTVNQR LPFFDSTLDM IHTTRFLDGW IDLILLDFVL FDWDRVLRPG 601: GLLWIDGFFC LKEDVSDYME AFKALRYRKH KWVVVPKKDK DDKEVFFSAV LEKPPRPFR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)