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AT4G00895.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATPase, F1 complex, OSCP/delta subunit protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPase, F1 complex, OSCP/delta subunit protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, catalytic core F(1), plasma membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 48 Blast hits to 48 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JRY2eggNOG:ENOG410ZFK2EMBL:AY062778EMBL:AY081648
EMBL:AY084518EMBL:CP002687EnsemblPlants:AT4G00895EnsemblPlants:AT4G00895.1
entrez:827987GeneID:827987GO:GO:0015986GO:GO:0046933
Gramene:AT4G00895.1hmmpanther:PTHR11910hmmpanther:PTHR11910:SF8HOGENOM:HOG000150662
InterPro:IPR000711InterPro:IPR026015KEGG:ath:AT4G00895OMA:FERICNE
PANTHER:PTHR11910PhylomeDB:Q8W481Proteomes:UP000006548RefSeq:NP_567198.1
STRING:3702.AT4G00895.1SUPFAM:0034989SUPFAM:SSF47928TAIR:AT4G00895
UniGene:At.27234UniProt:Q8W481
Coordinates (TAIR10) chr4:+:381823..382398
Molecular Weight (calculated) 20787.20 Da
IEP (calculated) 10.90
GRAVY (calculated) -0.26
Length 191 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTLSASVSS LNLPSLPPPP QPPLRSISSR FKSTVNATTS ASSTNLSKPT SSSPSSASYS QNRNPNFLKA ISFHLPQTKP SRVVTPPPPP VHDKAASGFA
101: AALVSVCQSK NCLGRTQEDV RRLMEFLVGE EKKRNKVLVN DVVERGKFGK HFKGLVKMLI ARGKSGILVD VLMEFERICN ELVSKKLVWV S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)