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AT3G63250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : homocysteine methyltransferase 2
Curator
Summary (TAIR10)
Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.
Computational
Description (TAIR10)
homocysteine methyltransferase 2 (HMT2); CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 6768 Blast hits to 6760 proteins in 1892 species: Archae - 4; Bacteria - 4264; Metazoa - 340; Fungi - 135; Plants - 163; Viruses - 0; Other Eukaryotes - 1862 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G63250-MONOMERBioCyc:ARA:GQT-156-MONOMERBRENDA:2.1.1.10DNASU:825500EC:2.1.1.10eggNOG:COG2040eggNOG:ENOG410ITI9
EMBL:AF219223EMBL:AF428402EMBL:AL138648EMBL:BT010165EMBL:CP002686EnsemblPlants:AT3G63250EnsemblPlants:AT3G63250.1
entrez:825500ExpressionAtlas:Q9M1W4Gene3D:3.20.20.330GeneID:825500Genevisible:Q9M1W4GO:GO:0008898GO:GO:0009086
GO:GO:0033528GO:GO:0046872gramene_pathway:2.1.1.-gramene_pathway:2.1.1.10gramene_pathway:PWY-5441gramene_pathway:PWY-702hmmpanther:PTHR21091
hmmpanther:PTHR21091:SF6HOGENOM:HOG000265278InParanoid:Q9M1W4InterPro:IPR003726KEGG:ath:AT3G63250KO:K00547OMA:CISIAEN
PaxDb:Q9M1W4Pfam:PF02574Pfam:Q9M1W4Pfscan:PS50970PhylomeDB:Q9M1W4PIR:T48114PIR:T51939
PRIDE:Q9M1W4PRO:PR:Q9M1W4PROSITE:PS50970ProteinModelPortal:Q9M1W4Proteomes:UP000006548RefSeq:NP_191884.1SABIO-RK:Q9M1W4
SMR:Q9M1W4STRING:3702.AT3G63250.1SUPFAM:SSF82282TAIR:AT3G63250tair10-symbols:ATHMT-2tair10-symbols:HMT-2tair10-symbols:HMT2
UniGene:At.21554UniProt:Q0WTD0UniProt:Q9M1W4
Coordinates (TAIR10) chr3:-:23370575..23372587
Molecular Weight (calculated) 36453.00 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.22
Length 333 amino acids
Sequence (TAIR10)
(BLAST)
001: MTGNSFNSMK DFLKQTGGYA VIDGGLATEF ERHGADLNDP LWSAKCLVTS PHLIHTVHLD YLEAGADIIS SASYQATIQG FEAKGFSREE SESLLKKSVE
101: IATEARNSYY DKCGTSSSMD DKILKKRPIL VAASVGSYGA YLADGSEYSG IYGDSITLEK LKDFHRRRLQ VLAESGADLI AFETIPNKIE AQAFADLLEE
201: GDVKIPGWFS FNSKDGVNVV SGDSIKECIS IAENCEKVVA VGINCTPPRF IEGLVLEIEK VTSKPILVYP NSGESYDADR KEWVENTGVG DEDFVSYVEK
301: WMDAGVSLLG GCCRTTPTTI RAIHKRLVNR RSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)