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AT3G63200.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : PATATIN-like protein 9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1673-MONOMERBioGrid:10809eggNOG:COG3621eggNOG:KOG0513
EMBL:AL138648EMBL:AY056391EMBL:BT001015EMBL:CP002686
EnsemblPlants:AT3G63200EnsemblPlants:AT3G63200.1entrez:825495GeneID:825495
Genevisible:Q93ZQ3GO:GO:0016042GO:GO:0016787Gramene:AT3G63200.1
hmmpanther:PTHR32241hmmpanther:PTHR32241:SF5HOGENOM:HOG000240266InParanoid:Q93ZQ3
IntAct:Q93ZQ3InterPro:IPR002641InterPro:IPR016035iPTMnet:Q93ZQ3
KEGG:ath:AT3G63200OMA:ENQICAKPaxDb:Q93ZQ3Pfam:PF01734
Pfam:Q93ZQ3PhylomeDB:Q93ZQ3PIR:T48109PRIDE:Q93ZQ3
PRO:PR:Q93ZQ3ProteinModelPortal:Q93ZQ3Proteomes:UP000006548RefSeq:NP_567142.1
SMR:Q93ZQ3STRING:3702.AT3G63200.1SUPFAM:SSF52151TAIR:AT3G63200
tair10-symbols:PLA IIIBtair10-symbols:PLP9UniGene:At.21311UniProt:Q93ZQ3
Coordinates (TAIR10) chr3:+:23346140..23347379
Molecular Weight (calculated) 41489.40 Da
IEP (calculated) 7.80
GRAVY (calculated) -0.17
Length 384 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: RDAVKFVAEK NSELFEIRYT GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML
301: GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV ASGKSSLPPS PCKESAVNPL ADGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)