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AT3G63020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3049)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL163816EMBL:CP002686EnsemblPlants:AT3G63020EnsemblPlants:AT3G63020.1entrez:825477GeneID:825477Gramene:AT3G63020.1
InterPro:IPR021410OMA:ENPDDECPfam:PF11250PhylomeDB:Q9LYC0PIR:T48091Proteomes:UP000006548RefSeq:NP_191861.1
TAIR:AT3G63020UniGene:At.54043UniGene:At.68765UniProt:Q9LYC0
Coordinates (TAIR10) chr3:+:23294425..23295039
Molecular Weight (calculated) 22928.50 Da
IEP (calculated) 6.72
GRAVY (calculated) -0.94
Length 204 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSSSTILTG DIDEEHRTSS MAEEDTPTHS HRRRWSTPVD SGGEPLQSLS VSRSLEIKSD HENPDDECRE HRGVCGVILD EYFSCSSKNN SYSFYLGGKI
101: SPWGPYGPPL LTESRSKAPS PRRGRSVTRK RDLPPFLTTL DCNGRPRFHH RRVRSEGRLE IASVAVDSPE IVSVRGREGL RIGTVRISQQ NDVVEDDNED
201: KQNH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)