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AT3G62880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Curator
Summary (TAIR10)
Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.
Computational
Description (TAIR10)
ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 198 Blast hits to 198 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J10FeggNOG:ENOG410YVIIEMBL:AK117583EMBL:AL162651EMBL:BT005150EMBL:CP002686EnsemblPlants:AT3G62880
EnsemblPlants:AT3G62880.1EnsemblPlants:AT3G62880.2entrez:825463GeneID:825463Genevisible:Q9LZH8GO:GO:0006811GO:GO:0009527
GO:GO:0009707GO:GO:0015266GO:GO:0015288GO:GO:0033365GO:GO:0042803GO:GO:0046930GO:GO:0071806
Gramene:AT3G62880.1Gramene:AT3G62880.2hmmpanther:PTHR14110hmmpanther:PTHR14110:SF5HOGENOM:HOG000006164InParanoid:Q9LZH8InterPro:IPR003397
KEGG:ath:AT3G62880OMA:FGFQCGLPaxDb:Q9LZH8Pfam:PF02466Pfam:Q9LZH8PhylomeDB:Q9LZH8PIR:T48077
PRO:PR:Q9LZH8Proteomes:UP000006548RefSeq:NP_001030919.1RefSeq:NP_191847.1STRING:3702.AT3G62880.1TAIR:AT3G62880tair10-symbols:ATOEP16-4
TCDB:1.B.30.2.1UniGene:At.43139UniProt:Q9LZH8
Coordinates (TAIR10) chr3:-:23245103..23246002
Molecular Weight (calculated) 14071.90 Da
IEP (calculated) 8.78
GRAVY (calculated) 0.28
Length 136 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEELLSAVP CSSLTVESVL RVATAGGLYG LCAGPRDARK IGLSGVSQAS FVAKSIGRFG FQCGLVSGVF TMTHCGLQRY RGKNDWVNAL VGGAVAGAAV
101: AISTRNWTQV VGMAGLVSAF SVLANCTRTE NPNNTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)