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AT3G62680.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : proline-rich protein 3
Curator
Summary (TAIR10)
Proline-rich protein
Computational
Description (TAIR10)
proline-rich protein 3 (PRP3); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 1 (TAIR:AT1G54970.1); Has 50468 Blast hits to 23098 proteins in 1486 species: Archae - 263; Bacteria - 8049; Metazoa - 18736; Fungi - 5929; Plants - 9093; Viruses - 1757; Other Eukaryotes - 6641 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J5VGeggNOG:ENOG410Y08DEMBL:AF110987EMBL:AL162651EMBL:CP002686EnsemblPlants:AT3G62680EnsemblPlants:AT3G62680.1
entrez:825442GeneID:825442Genevisible:Q9LZJ7GO:GO:0005576GO:GO:0005618GO:GO:0009506GO:GO:0010054
GO:GO:0071365GO:GO:0071369GO:GO:0072732Gramene:AT3G62680.1hmmpanther:PTHR33470hmmpanther:PTHR33470:SF1HOGENOM:HOG000152594
InParanoid:Q9LZJ7iPTMnet:Q9LZJ7KEGG:ath:AT3G62680OMA:DLAYCRVPaxDb:Q9LZJ7Pfam:PF01190Pfam:Q9LZJ7
PIR:T48057PIR:T52077PRIDE:Q9LZJ7PRO:PR:Q9LZJ7ProteinModelPortal:Q9LZJ7Proteomes:UP000006548RefSeq:NP_191827.1
STRING:3702.AT3G62680.1TAIR:AT3G62680tair10-symbols:ATPRP3tair10-symbols:PRP3UniGene:At.34072UniProt:Q9LZJ7
Coordinates (TAIR10) chr3:+:23182778..23183819
Molecular Weight (calculated) 34418.80 Da
IEP (calculated) 9.72
GRAVY (calculated) -0.30
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MAITRSSLAI CLILSLVTIT TADYYSPSSP PVYKSPEHKP TLPSPVYTPP VYKPTLSPPV YTKPTIPPPV YTPPVYKHTP SPPVYTKPTI PPPVYTPPVY
101: KPTLSPPVYT KPTIPPPVYT PPVYKPTPVY TKPTIPPPVY TPPVYKPTPS PPVYKKSPSY SSPPPPYVPK PTYTPTTKPY VPEILKAVDG IILCKNGYET
201: YPILGAKIQI VCSDPASYGK SNTEVVIYSN PTDSKGYFHL SLTSIKDLAY CRVKLYLSPV ETCKNPTNVN KGLTGVPLAL YGYRFYPDKN LELFSVGPFY
301: YTGPKAAPAT PKY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)