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AT3G62650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.713
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1180-MONOMERBioCyc:ARA:GQT-210-MONOMERDNASU:825439eggNOG:ENOG410J8J2
eggNOG:ENOG410ZHKUEMBL:AL162651EMBL:AY054562EMBL:AY064642
EMBL:CP002686EnsemblPlants:AT3G62650EnsemblPlants:AT3G62650.1EnsemblPlants:AT3G62650.2
entrez:825439GeneID:825439Gramene:AT3G62650.1Gramene:AT3G62650.2
hmmpanther:PTHR33702hmmpanther:PTHR33702:SF5HOGENOM:HOG000238119KEGG:ath:AT3G62650
OMA:QRDTASKPhylomeDB:Q9LZK0PIR:T48054Proteomes:UP000006548
RefSeq:NP_191824.1RefSeq:NP_974478.1STRING:3702.AT3G62650.1TAIR:AT3G62650
UniGene:At.20955UniGene:At.75261UniProt:Q9LZK0
Coordinates (TAIR10) chr3:+:23168531..23168989
Molecular Weight (calculated) 17503.60 Da
IEP (calculated) 11.16
GRAVY (calculated) -0.57
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MEITPKRYWR RWRGYEKLDG SSETTSGRRK GKRVKMDPTR KKRFWRIKIV PKLRILKTAS PKKFLVWLRD SYVKMMMRLA NSRVVGSSGY GGSGFGSGQM
101: KEYDEKMLVE IYKSILMVQA QGNLVHRDTP NNNLKLPSEP AVVSVVSSVV TC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)