AT3G62630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF1645) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G15760.1); Has 309 Blast hits to 289 proteins in 68 species: Archae - 3; Bacteria - 16; Metazoa - 56; Fungi - 10; Plants - 169; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:23163937..23165079 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 41873.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.76 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.92 | ||||||||||||||||||||||||
| Length | 380 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLVESFSHG DPDTPRFSDD FGSGSACSTP FVSAPSSPGR GPPPGYFFSA PSSPMHFFLC SASSSSENPK KLDTSSCGDF EFDFSSRLSS SSGPLGGVSM 101: TSAEELFSNG QIKPMKLSSH LQRPQILSPL LDLENEEEDD DDETKPNGEM KRGRDLKLRS RSVHRKARSL SPLRNAAYQW NQEEGEEEEV AGEREVKECI 201: RKLQEDENVP SAETTPSCSA SSSRSSSYGR NSKKWIFLKD LLHRSKSEGR GNGKEKFWSN ISFSPSNFKD KKLKSSQLEE KPIQETVDAA VESKKQKQKQ 301: PPAKKAPVNG KPTNGIAKRR GLQPSAHELH YTTNRAQAEE MKKRTYLPYR HGLFGCLGFS SKGYSALNGL ARSLNPVSSG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)