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AT3G62590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIK5eggNOG:ENOG410ZUTCEMBL:AY054280EMBL:BT002305
EMBL:CP002686EnsemblPlants:AT3G62590EnsemblPlants:AT3G62590.1entrez:825433
ESTHER:arath-AT3g62590Gene3D:3.40.50.1820GeneID:825433GO:GO:0006629
GO:GO:0016021GO:GO:0016787Gramene:AT3G62590.1hmmpanther:PTHR21493
hmmpanther:PTHR21493:SF117HOGENOM:HOG000237724InterPro:IPR002921InterPro:IPR029058
KEGG:ath:AT3G62590ncoils:CoilOMA:LRVQPRWPfam:PF01764
PhylomeDB:Q940L4Proteomes:UP000006548RefSeq:NP_567131.1SMR:Q940L4
STRING:3702.AT3G62590.1SUPFAM:SSF53474TAIR:AT3G62590TMHMM:TMhelix
UniGene:At.48800UniGene:At.69639UniProt:Q940L4
Coordinates (TAIR10) chr3:-:23147973..23150169
Molecular Weight (calculated) 73048.10 Da
IEP (calculated) 8.90
GRAVY (calculated) -0.31
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGVFLKMSV VGVSPMIPVG PSSFICAIGG SVEEKSTAAS LPRWVSLRRL RPLEFLRIGG KREEKGTVRD DDAVLLERRD RNRNENDNGN WVLKILEVGS
101: IWKGKRQRSG GGGGGEEDEE EEVAEPKKKE DLCEECDFCR IDDDDEDEEK EKTVFEFSEM LSKIPVEDAQ MFAKLSFLGN LAYSIPKIKP ENLLKYQKLR
201: FVTSSIEKRM SLKVEENNNG EEDEEKKKLI NPAVAYRIAA SAASRLFSHS KSVLPFGSSK RQDNEEASLL ATADSVTAVV AAKEEVKQAV ADDLKSNRSP
301: PCEWFVCDDD KSGTRFFFIQ GSDSLASWQA NLLFEPVPFE DLDVLVHRGI YEAAKGIYEQ MLPEVHAHLN SRGKNRAFLR FSGHSLGGSL SLLVNLMLLI
401: RGQVPASSLL PVITFGSPCI MCGGDRLLQK LGLPKSHLLG ISMHRDIVPR AFSCNYPNRA AKLLKALNGN FRNHPCLNNQ NVLYSPMGKL LILQPSERFS
501: PPHPLLPPGS GLYLLASKNT DETEKSLRAA KILFFNSPHP LEILSDRRSY GSEGKIKRNH DMSSYLKALR HVIRKELKQM KAERDQWLRK FFIINILFSG
601: RDSLKLITRF VASRSSQLVI IFFLPIRLLI MSVYSVVFHH SQAHFSFFK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)