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AT3G62450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.776
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J26QeggNOG:ENOG410Z4RXEMBL:AK119029EMBL:AL162507
EMBL:BT005656EMBL:CP002686EnsemblPlants:AT3G62450EnsemblPlants:AT3G62450.1
entrez:825418GeneID:825418GO:GO:0016021Gramene:AT3G62450.1
hmmpanther:PTHR36377hmmpanther:PTHR36377:SF1HOGENOM:HOG000077586KEGG:ath:AT3G62450
OMA:FLDWYVKPhylomeDB:Q9LZP5PIR:T48037Proteomes:UP000006548
RefSeq:NP_191804.1STRING:3702.AT3G62450.1TAIR:AT3G62450TMHMM:TMhelix
UniGene:At.4788UniProt:Q9LZP5
Coordinates (TAIR10) chr3:+:23098144..23098630
Molecular Weight (calculated) 8455.25 Da
IEP (calculated) 9.04
GRAVY (calculated) -0.32
Length 74 amino acids
Sequence (TAIR10)
(BLAST)
1: MMKTRFLDWY LKIAIGSAII GGGMEFFMIK TGFYDKVTVI EAERRALENS PEAQAIREAL NPWRNKDAET SKTP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)