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AT3G62420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : basic region/leucine zipper motif 53
Curator
Summary (TAIR10)
Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.
Computational
Description (TAIR10)
basic region/leucine zipper motif 53 (BZIP53); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1452 Blast hits to 1450 proteins in 90 species: Archae - 2; Bacteria - 4; Metazoa - 13; Fungi - 3; Plants - 1410; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J076eggNOG:ENOG410YP2CEMBL:AF400620EMBL:AL162507EMBL:AY050923EMBL:AY091421EMBL:CP002686
EnsemblPlants:AT3G62420EnsemblPlants:AT3G62420.1entrez:825415GeneID:825415Genevisible:Q9LZP8GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0006971GO:GO:0009267GO:GO:0043565GO:GO:0045735GO:GO:0045893GO:GO:0046982
GO:GO:2000693Gramene:AT3G62420.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF146HOGENOM:HOG000237945IntAct:Q9LZP8InterPro:IPR004827
KEGG:ath:AT3G62420MINT:MINT-2834954ncoils:CoilOMA:DTHRREKPaxDb:Q9LZP8Pfam:PF00170Pfscan:PS50217
PhylomeDB:Q9LZP8PIR:T48034PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q9LZP8Proteomes:UP000006548RefSeq:NP_191801.1
scanprosite:PS00036SMART:SM00338SMR:Q9LZP8STRING:3702.AT3G62420.1SUPFAM:SSF57959TAIR:AT3G62420tair10-symbols:ATBZIP53
tair10-symbols:BZIP53UniGene:At.48798UniProt:Q9LZP8
Coordinates (TAIR10) chr3:-:23091844..23092284
Molecular Weight (calculated) 16806.00 Da
IEP (calculated) 5.07
GRAVY (calculated) -0.90
Length 146 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)