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AT3G62370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.739
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heme binding
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
heme binding; FUNCTIONS IN: heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c-552/DMSO reductase-like, haem-binding domain (InterPro:IPR019020); Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG9YeggNOG:ENOG410XRPWEMBL:AL162507EMBL:AY080841EMBL:AY133773EMBL:CP002686EnsemblPlants:AT3G62370
EnsemblPlants:AT3G62370.1entrez:825410GeneID:825410GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0016021
GO:GO:0020037Gramene:AT3G62370.1hmmpanther:PTHR36044hmmpanther:PTHR36044:SF1HOGENOM:HOG000006070InterPro:IPR019020KEGG:ath:AT3G62370
OMA:HGSGHYTPfam:PF09459PhylomeDB:Q9LZQ3PIR:T48029Proteomes:UP000006548RefSeq:NP_191796.1SMART:SM00887
TAIR:AT3G62370TMHMM:TMhelixUniGene:At.34125UniProt:Q9LZQ3
Coordinates (TAIR10) chr3:+:23080789..23083234
Molecular Weight (calculated) 39854.20 Da
IEP (calculated) 4.45
GRAVY (calculated) -0.37
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MLQLVVVAWL LIFTAETVVP HQESGEWSCE SDSEIQVLAD FRPGIITLDG HNDDWKDIDG SEFPLRPALD PDSDHEYDAG KMTVKALHDG RDIYFLLEID
101: GNYAYDKGEN NKCPSVALMF QIGDQATYHN MGGCKEGTDS CTSKACRGFE VDIMHFSIGN AIPGRLYGGN PIDNGEGNGG DRFGHLVDIY AWNPHCRYLD
201: GLGPSGNDSS AQNDWHGAWW HSSFTTLSGY VEEDSPYTPD GKKGTYYFEF SRPLRTMDRL QQDVQFTLGS PAKMSVAFWY PVDSKPWHGS GHYTINCDWT
301: PLDISSGSSS GLTASTVKGS SDGASITAIL LSMISLVFSG FIAYRLFSPR NVPFTPMENN L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)