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AT3G61920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.983
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXGKeggNOG:ENOG4111EFJEMBL:AL138642EMBL:AY062598EMBL:BT006567EMBL:CP002686EnsemblPlants:AT3G61920
EnsemblPlants:AT3G61920.1entrez:825365GeneID:825365Gramene:AT3G61920.1hmmpanther:PTHR33148hmmpanther:PTHR33148:SF9HOGENOM:HOG000090453
IntAct:Q9M273InterPro:IPR025322KEGG:ath:AT3G61920OMA:PLLHNEEPfam:PF14009PhylomeDB:Q9M273PIR:T47984
Proteomes:UP000006548RefSeq:NP_191751.1STRING:3702.AT3G61920.1TAIR:AT3G61920UniGene:At.27290UniProt:Q9M273
Coordinates (TAIR10) chr3:-:22932638..22933201
Molecular Weight (calculated) 19939.80 Da
IEP (calculated) 6.23
GRAVY (calculated) -0.05
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCVFKGNG GSRKLYDKDD SLIKVVTPNG GVMELHPPIF AEFITNEFPG HVIHDSLSLR HSSPPLLHGE ELFPGNIYYL LPLSSSAAAT AQLDSSDQLS
101: TPYRMSFGKT PIMAALSGGG CGVWKVRLVI SPEQLAEILA EDVETEALVE SVRTVAKCGG YGCGGGVHSR ANSDQLSVTS SFKGKLW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)