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AT3G61880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.696
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome p450 78a9
Curator
Summary (TAIR10)
Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.
Computational
Description (TAIR10)
cytochrome p450 78a9 (CYP78A9); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: fruit development; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, flower development stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 32342 Blast hits to 32220 proteins in 1730 species: Archae - 48; Bacteria - 3539; Metazoa - 11622; Fungi - 6799; Plants - 9227; Viruses - 3; Other Eukaryotes - 1104 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G61880-MONOMERBioCyc:ARA:GQT-528-MONOMERBioGrid:10675EC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AB036059
EMBL:AL138642EMBL:AY062748EMBL:AY086928EMBL:BT008891EMBL:CP002686EnsemblPlants:AT3G61880EnsemblPlants:AT3G61880.1
entrez:825361ExpressionAtlas:Q9SLP1Gene3D:1.10.630.10GeneID:825361Genevisible:Q9SLP1GO:GO:0004497GO:GO:0005506
GO:GO:0010154GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0040008GO:GO:0048316gramene_pathway:1.14.13.21
gramene_pathway:PWY-3101gramene_pathway:PWY-5060gramene_pathway:PWY-5152gramene_pathway:PWY1F-823hmmpanther:PTHR24298hmmpanther:PTHR24298:SF46HOGENOM:HOG000218628
IntAct:Q9SLP1InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972PaxDb:Q9SLP1Pfam:PF00067Pfam:Q9SLP1
PhylomeDB:Q9SLP1PIR:T47980PRIDE:Q9SLP1PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9SLP1PROSITE:PS00086
ProteinModelPortal:Q9SLP1Proteomes:UP000006548RefSeq:NP_191747.1scanprosite:PS00086SMR:Q9SLP1STRING:3702.AT3G61880.2SUPFAM:SSF48264
TAIR:AT3G61880tair10-symbols:CYP78A9TMHMM:TMhelixUniGene:At.23925UniProt:Q9SLP1
Coordinates (TAIR10) chr3:-:22906114..22907890
Molecular Weight (calculated) 60039.70 Da
IEP (calculated) 7.79
GRAVY (calculated) -0.06
Length 534 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)