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AT3G61870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGXKeggNOG:ENOG4111JTZEMBL:AL138642EMBL:AY058164EMBL:AY098978EMBL:CP002686EnsemblPlants:AT3G61870
EnsemblPlants:AT3G61870.1entrez:825360ExpressionAtlas:Q9M277GeneID:825360GO:GO:0009507GO:GO:0009534GO:GO:0009706
GO:GO:0009941GO:GO:0016021Gramene:AT3G61870.1hmmpanther:PTHR34679hmmpanther:PTHR34679:SF2HOGENOM:HOG000264449IntAct:Q9M277
InterPro:IPR025067KEGG:ath:AT3G61870OMA:GALNTWFPfam:PF13301PhylomeDB:Q9M277PIR:T47979Proteomes:UP000006548
RefSeq:NP_191746.1STRING:3702.AT3G61870.1TAIR:AT3G61870TMHMM:TMhelixUniGene:At.22960UniProt:Q9M277
Coordinates (TAIR10) chr3:+:22902702..22903895
Molecular Weight (calculated) 29587.00 Da
IEP (calculated) 9.82
GRAVY (calculated) 0.09
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MATTLHCLST LHLLPRTHHP KTLNSLKPIT TKSQPCKTPE IPSTPNALQL LKSSSLPLAV IALPFFLDPQ DAAAAGGEFG ILEGRSFALI HPIVMGGLFA
101: YTLWTGYLGW QWRRVRTIQS EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY RDKHFDAGSV LLGFGVLEAV FGGVNTYLRT
201: GKLFPGPHLY AGAGITVLWA AAAALVPAMQ KGNDTARSLH IALNAVNVLL FIWQIPTGLD IVLKVFEFTK WP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)