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AT3G61720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.977
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ca2+dependent plant phosphoribosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ca2+dependent plant phosphoribosyltransferase family protein; INVOLVED IN: tryptophan biosynthetic process; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Ca2+dependent plant phosphoribosyltransferase family protein (TAIR:AT5G03435.1); Has 1192 Blast hits to 1092 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 350; Fungi - 87; Plants - 677; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTTQeggNOG:ENOG41107INEMBL:AL132959EMBL:CP002686EnsemblPlants:AT3G61720EnsemblPlants:AT3G61720.1entrez:825345
Gene3D:2.60.40.150GeneID:825345GO:GO:0016021GO:GO:0016757Gramene:AT3G61720.1hmmpanther:PTHR10024hmmpanther:PTHR10024:SF97
HOGENOM:HOG000238008InterPro:IPR000008InterPro:IPR013583KEGG:ath:AT3G61720OMA:ELLMSVWPfam:PF00168Pfam:PF08372
Pfscan:PS50004PhylomeDB:Q9M366PIR:T47964PROSITE:PS50004Proteomes:UP000006548RefSeq:NP_191731.1SMART:SM00239
SMR:Q9M366STRING:3702.AT3G61720.1SUPFAM:SSF49562TAIR:AT3G61720TMHMM:TMhelixUniGene:At.65308UniProt:Q9M366
Coordinates (TAIR10) chr3:-:22843011..22845398
Molecular Weight (calculated) 90773.40 Da
IEP (calculated) 8.97
GRAVY (calculated) -0.08
Length 795 amino acids
Sequence (TAIR10)
(BLAST)
001: MAANKDEFSV KQIFPKLGGE RGARNPRYGP TSSHDLVEQM EFLYVQVIQA INNSVVNPSA RICCPVVEIT LGNYKSSTKN LPMGPNMDWN QVFAFDKSKG
101: DVLSVTLKDG PTNTVINKRN FKLASEIPTR VPPDARIAPQ WYSMHNTETD FYMELLMSVW FGTQVDEVYP EAWFSDACEV CASRVINTRP KVYLAPRLCY
201: VRVTIVSGHD LISKDKNKTP SVYVTATLGK VALKTKVSSG TNPSWNQDLI FVASEPLEGT VYIRLIDRED EQHEGCIGTL KKKLTEMTPL KVPSSAPALF
301: YDIEMPTEVK PAGDSRRFAS RLKMKLATDQ AYHVAEECTQ YSSDNRAFVK GLWPGLLGKL EIGILGATGL KGSDEKKQTI DSYVVAKYGN KWARTRTVVN
401: SVSPKWNEQY SWDVYEKCTV LTLGIYDNRQ ILEDKNKAND VPIGKVRIPL NRVQSDWIYT CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR
501: WMLPKAHYKS PLSMYQIDKL RAQAVEINCA NLARTEPALR SEVVSDMLKP KSRNFSIRIS KDNFDRLYTV VKMVLWCVSV IASVRSTTAC TPKFIALGVS
601: FVFLFWEYYI YWLVTSWLVA YCIVLCIVVI LLREILKSPR QTYNWLFYRN VTPPPLILVD LKLRKLDSIN LDELAEEFDS FPSSENDLNI LRMRYDRLRK
701: IMENVMLLMG DAATQGERLL AAFTLLERPF VLIILLALCY CSMLVVCLGW DLHVRKCLIF VFICYWVQLP WFRNNLPDGS LNFFRRLPSN EDLMF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)