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AT3G61440.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine synthase C1
Curator
Summary (TAIR10)
Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.
Computational
Description (TAIR10)
cysteine synthase C1 (CYSC1); FUNCTIONS IN: cysteine synthase activity, copper ion binding, L-3-cyanoalanine synthase activity; INVOLVED IN: cysteine biosynthetic process, detoxification of nitrogen compound, cyanide metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3); Has 22016 Blast hits to 21996 proteins in 2681 species: Archae - 390; Bacteria - 15417; Metazoa - 417; Fungi - 652; Plants - 575; Viruses - 2; Other Eukaryotes - 4563 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G61440-MONOMERBioCyc:ARA:GQT-1238-MONOMERBioCyc:ARA:GQT-1623-MONOMERBioGrid:10631BRENDA:4.4.1.9EC:2.5.1.47EC:4.4.1.9
eggNOG:COG0031eggNOG:KOG1252EMBL:AB024282EMBL:AJ010505EMBL:AK226606EMBL:AL132962EMBL:AY087208
EMBL:AY093094EMBL:AY128782EMBL:CP002686EnsemblPlants:AT3G61440EnsemblPlants:AT3G61440.1entrez:825317ExpressionAtlas:Q9S757
GeneID:825317Genevisible:Q9S757GO:GO:0004124GO:GO:0005507GO:GO:0005739GO:GO:0006535GO:GO:0006955
GO:GO:0009507GO:GO:0016740GO:GO:0019344GO:GO:0019499GO:GO:0019500GO:GO:0030170GO:GO:0050017
GO:GO:0051410GO:GO:0080147gramene_pathway:4.4.1.9gramene_pathway:ASPSYNII-PWYgramene_pathway:P401-PWYhmmpanther:PTHR10314hmmpanther:PTHR10314:SF80
HOGENOM:HOG000217394InParanoid:Q9S757IntAct:Q9S757InterPro:IPR001216InterPro:IPR001926InterPro:IPR005856InterPro:IPR005859
InterPro:IPR031111iPTMnet:Q9S757KEGG:00270+2.5.1.47KEGG:00920+2.5.1.47KEGG:ath:AT3G61440KO:K13034OMA:NVVVIFP
PANTHER:PTHR10314:SF80PaxDb:Q9S757Pfam:PF00291Pfam:Q9S757PhylomeDB:Q9S757PIR:T47936PRIDE:Q9S757
PRO:PR:Q9S757PROSITE:PS00901ProteinModelPortal:Q9S757Proteomes:UP000006548RefSeq:NP_001078324.1RefSeq:NP_001190152.1RefSeq:NP_191703.1
scanprosite:PS00901SMR:Q9S757STRING:3702.AT3G61440.1SUPFAM:SSF53686TAIR:AT3G61440tair10-symbols:ARATH;BSAS3;1tair10-symbols:ATCYSC1
tair10-symbols:CYSC1TIGRfam:TIGR01136TIGRfam:TIGR01139TIGRFAMs:TIGR01136TIGRFAMs:TIGR01139UniGene:At.21833unipathway:UPA00136
UniProt:Q9S757
Coordinates (TAIR10) chr3:+:22735885..22737792
Molecular Weight (calculated) 39929.60 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.11
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)