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AT3G61220.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, (-)-menthol dehydrogenase activity, (+)-neomenthol dehydrogenase activity; INVOLVED IN: response to karrikin, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.1); Has 78247 Blast hits to 78183 proteins in 3234 species: Archae - 733; Bacteria - 53633; Metazoa - 4843; Fungi - 3816; Plants - 2340; Viruses - 0; Other Eukaryotes - 12882 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G61220-MONOMERBioCyc:ARA:GQT-53-MONOMERBioCyc:MetaCyc:AT3G61220-MONOMERBioGrid:10608BRENDA:1.1.1.208EC:1.1.1.208eggNOG:COG1028
eggNOG:KOG1208EMBL:AL137898EMBL:AY045884EMBL:AY091305EMBL:CP002686EnsemblPlants:AT3G61220EnsemblPlants:AT3G61220.1
entrez:825294ExpressionAtlas:Q9M2E2Gene3D:3.40.50.720GeneID:825294Genevisible:Q9M2E2GO:GO:0006952GO:GO:0047501
hmmpanther:PTHR24322hmmpanther:PTHR24322:SF442InParanoid:Q9M2E2InterPro:IPR002347InterPro:IPR016040PANTHER:PTHR24322PaxDb:Q9M2E2
Pfam:PF00106Pfam:Q9M2E2PhylomeDB:Q9M2E2PIR:T47914PRIDE:Q9M2E2PRINTS:PR00080PRINTS:PR00081
PRO:PR:Q9M2E2ProteinModelPortal:Q9M2E2Proteomes:UP000006548Reactome:R-ATH-2162123RefSeq:NP_191681.1SMR:Q9M2E2STRING:3702.AT3G61220.2
SUPFAM:SSF51735TAIR:AT3G61220UniGene:At.972UniProt:Q9M2E2
Coordinates (TAIR10) chr3:+:22663025..22664316
Molecular Weight (calculated) 32805.30 Da
IEP (calculated) 5.14
GRAVY (calculated) -0.20
Length 296 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI
101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL
201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)