suba logo
AT3G61130.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): Golgi
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): Golgi
  • PMID:15295017 (2004): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galacturonosyltransferase 1
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
galacturonosyltransferase 1 (GAUT1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 3 (TAIR:AT4G38270.2); Has 1521 Blast hits to 1503 proteins in 273 species: Archae - 4; Bacteria - 491; Metazoa - 148; Fungi - 2; Plants - 840; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Protein Annotations
BioGrid:10599BRENDA:2.4.1.43CAZy:GT8EC:2.4.1.43
eggNOG:ENOG410IH6BeggNOG:ENOG4111FC1EMBL:AJ243015EMBL:AL137898
EMBL:AY039515EMBL:BT000630EMBL:CP002686EMBL:DQ370437
EnsemblPlants:AT3G61130EnsemblPlants:AT3G61130.1entrez:825285ExpressionAtlas:Q9LE59
Gene3D:3.90.550.10GeneID:825285Genevisible:Q9LE59GO:GO:0000139
GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0010289
GO:GO:0016021GO:GO:0047262Gramene:AT3G61130.1gramene_pathway:2.4.1.43
gramene_pathway:PWY-1061hmmpanther:PTHR32116hmmpanther:PTHR32116:SF4HOGENOM:HOG000239479
InParanoid:Q9LE59InterPro:IPR002495InterPro:IPR029044InterPro:IPR029993
iPTMnet:Q9LE59KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-
KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-KEGG:00540+2.4.1.-
KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-
KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-
KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-KEGG:00944+2.4.1.-
KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-KEGG:ath:AT3G61130KO:K13648
ncoils:CoilOMA:LTGLWDIPANTHER:PTHR32116PaxDb:Q9LE59
Pfam:PF01501Pfam:Q9LE59PhylomeDB:Q9LE59PIR:T47905
PRIDE:Q9LE59PRO:PR:Q9LE59ProteinModelPortal:Q9LE59Proteomes:UP000006548
RefSeq:NP_191672.1SMR:Q9LE59STRING:3702.AT3G61130.1SUPFAM:SSF53448
TAIR:AT3G61130tair10-symbols:GAUT1tair10-symbols:LGT1TMHMM:TMhelix
UniGene:At.969UniPathway:UPA00845UniProt:Q9LE59UniProt:W8PUP8
Coordinates (TAIR10) chr3:+:22622399..22625514
Molecular Weight (calculated) 77377.10 Da
IEP (calculated) 9.95
GRAVY (calculated) -0.48
Length 673 amino acids
Sequence (TAIR10)
(BLAST)
001: MALKRGLSGV NRIRGSGGGS RSVLVLLIFF CVFAPLCFFV GRGVYIDSSN DYSIVSVKQN LDWRERLAMQ SVRSLFSKEI LDVIATSTAD LGPLSLDSFK
101: KNNLSASWRG TGVDPSFRHS ENPATPDVKS NNLNEKRDSI SKDSIHQKVE TPTKIHRRQL REKRREMRAN ELVQHNDDTI LKLENAAIER SKSVDSAVLG
201: KYSIWRRENE NDNSDSNIRL MRDQVIMARV YSGIAKLKNK NDLLQELQAR LKDSQRVLGE ATSDADLPRS AHEKLRAMGQ VLAKAKMQLY DCKLVTGKLR
301: AMLQTADEQV RSLKKQSTFL AQLAAKTIPN PIHCLSMRLT IDYYLLSPEK RKFPRSENLE NPNLYHYALF SDNVLAASVV VNSTIMNAKD PSKHVFHLVT
401: DKLNFGAMNM WFLLNPPGKA TIHVENVDEF KWLNSSYCPV LRQLESAAMR EYYFKADHPT SGSSNLKYRN PKYLSMLNHL RFYLPEVYPK LNKILFLDDD
501: IIVQKDLTPL WEVNLNGKVN GAVETCGESF HRFDKYLNFS NPHIARNFNP NACGWAYGMN MFDLKEWKKR DITGIYHKWQ NMNENRTLWK LGTLPPGLIT
601: FYGLTHPLNK AWHVLGLGYN PSIDKKDIEN AAVVHYNGNM KPWLELAMSK YRPYWTKYIK FDHPYLRRCN LHE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)