AT3G60450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphoglycerate mutase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60440.1); Has 301 Blast hits to 297 proteins in 123 species: Archae - 0; Bacteria - 109; Metazoa - 16; Fungi - 49; Plants - 68; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22340982..22342187 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30864.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.87 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||
| Length | 274 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESPKSNVDD GYQNIFVMRH GDRIDNFEPL WVSTAERPWD PPLVQDGMIR AFRTGQRIRS QIGFPIHRVF VSPFLRCLQT ASEVVAALSA VNVDPNAMSS 101: KDVPSIDKSK LKVSIELGLC EMLNSVAIRR ELAPKDGKFD FTVSDIETMF PEGMVDHNVD MVYKELPKWE ESVEGCRDRY VKVVKALADK YPEENLLLVT 201: HGEGVGTTFS TFYKDTTVYE VDYCAYVEMR RQVSSEDGSV KAGDYEVVLS HGQAGIRFSH DPVSYEPVIS HSPV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)