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AT3G60420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 266 Blast hits to 264 proteins in 108 species: Archae - 0; Bacteria - 75; Metazoa - 4; Fungi - 55; Plants - 65; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Protein Annotations
DNASU:825213eggNOG:ENOG410YGUZeggNOG:KOG3734EMBL:AK119045EMBL:AL138646EMBL:BT006233EMBL:CP002686
EnsemblPlants:AT3G60420EnsemblPlants:AT3G60420.1entrez:825213ExpressionAtlas:Q9M217Gene3D:3.40.50.1240GeneID:825213Gramene:AT3G60420.1
hmmpanther:PTHR16469HOGENOM:HOG000239647InterPro:IPR012398InterPro:IPR013078InterPro:IPR029033OMA:SVEMRRQPfam:PF00300
PhylomeDB:Q9M217PIR:T47853PIRSF:PIRSF015897Proteomes:UP000006548RefSeq:NP_191601.1SMART:SM00855STRING:3702.AT3G60420.2
SUPFAM:SSF53254TAIR:AT3G60420UniGene:At.34452UniProt:Q9M217
Coordinates (TAIR10) chr3:+:22334446..22335710
Molecular Weight (calculated) 30366.20 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.20
Length 270 amino acids
Sequence (TAIR10)
(BLAST)
001: MESAKSIIGG HQNVILMRHG DRLDNFEPLW TSTAARPWDP PLAQDGKDRA FRTGQRIRSQ LGVPIHRVFV SPFLRCIQTA SEVVAALSAV DFDPIAMSSK
101: DVLSIDNTKI KVAIEFGLSE IPHPIFIKSE VAPKDGKFDF KISDLEAMFP EGTVDSNVDM VYKEVPEWGE SAQAFEDRYY KTVKILAEKY PSENLLLVTH
201: WGAVSVAFYN YFKDATKYVV DYCGSVEMRR QILNGDGFGK FEVVTSHGVS YKYTKIPVHD HVVVSRQSPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)